Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01994 ATGGCAGCTGAGCTAGTCAACGGTGCAACAAGTGAGAAACTGGCTGAAACTGATTGGACAAAAAATATTGAAATTTGTGAACTAGTTGCTCATGATAAAAGGCAAGCAAGAGATGCTGTTAAAGCTATAAAAAAGAGACTAGGAAGCAAACACCCCAATACTCAACTCTTTGCTGTCATGTTGCTGGAAATGTTGATGAACAATATTGGAGAGCATATTCATGAGCAGGTGATTGATACTGGAATTATTACTATTCTCGTAAAAATTGTGAAGAAAAAGTCTGATTTGCCTGTCAGGGAGCGGATATTTCTCCTACTAGATGCCACACAAACATCCCTTCGTGGTGCATCTGGAAAGTTTCCACAGTATTATAATGCATATTATGATTTGGTGAGGGCTGGAGTGCAGTTTGCTCAAAGGGATCAAGTGGTCCAACCAAATATTCCTATTTCACAACCTAGTAGGACTAGTAATGTACCAAACAGGGAGCAGGCCTCACCTAGACATGAAGCAGTTGCTCAGCCAGCAGAGTCCCAGACTGTCCCTGAATCTAGCATTATTCAAAAGGCTAGCAATGCATTAGAAGTACTAAAAGAGGTCCTTGATGCTGTTGATGCTCAAAATCCTCAGGGAGCAAGTGATGAATTCACCCTTGACCTTGTAGAACAATGTTCTTTTCAAAAACAAAGGGTTATGCATCTTGTAATGGCTTCTCGAGATGAAAGGATAATTTCTCGAGCAATTGAATTGAATGAGCAACTTCAGAAAGTTCTTGCAAGACATGATGACCTTCTTGCTGGCAGAGTTACAATGACCACCACTCGATTCGACCATGAAGAAGCAGAGGAGGAAGAGGAGCCTGAACAGTTAGTCCGAAGATTACGGAAGGGAAAGGCTTGTGCAAGGCCTGAAGATGAGGAGACTGAAACCAACATCCCTCGCTTGGGTTTGCTTGGAGAGAGACTCAACCGTCCACTCTCAATAGAGTCACCTTCTCGAGAAGTTGATACTCGTTCTCCACCAGTTGTGATCCCGCCATCTCGAGAAGCTAATACCCGATCTCCACCTGTTGTGATTCCACCTCCTCGGCCGAAACAGAATGGGGAGGTTCCTCATCCAGTGGAAATTCCACCCCCACCTGCAAAGCACATTGAGAGGGAGAGGTTTTTTCAGGAAAACAAGGATGGTTCTAATTTGTCTGGCCACATGAGAGGTATCACCTTACATAGTCGTAATGGCAGCAGCTCTCGGAGTGGAAGCTTTGATTTTAGTGACTGA 1278 0.439 MAAELVNGATSEKLAETDWTKNIEICELVAHDKRQARDAVKAIKKRLGSKHPNTQLFAVMLLEMLMNNIGEHIHEQVIDTGIITILVKIVKKKSDLPVRERIFLLLDATQTSLRGASGKFPQYYNAYYDLVRAGVQFAQRDQVVQPNIPISQPSRTSNVPNREQASPRHEAVAQPAESQTVPESSIIQKASNALEVLKEVLDAVDAQNPQGASDEFTLDLVEQCSFQKQRVMHLVMASRDERIISRAIELNEQLQKVLARHDDLLAGRVTMTTTRFDHEEAEEEEEPEQLVRRLRKGKACARPEDEETETNIPRLGLLGERLNRPLSIESPSREVDTRSPPVVIPPSREANTRSPPVVIPPPRPKQNGEVPHPVEIPPPPAKHIERERFFQENKDGSNLSGHMRGITLHSRNGSSSRSGSFDFSD 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01994 425 MobiDBLite consensus disorder prediction 394 425 - -
Gma04g01994 425 SUPERFAMILY ENTH/VHS domain 4 139 IPR008942 -
Gma04g01994 425 MobiDBLite consensus disorder prediction 379 393 - -
Gma04g01994 425 SUPERFAMILY GAT-like domain 144 268 - -
Gma04g01994 425 MobiDBLite consensus disorder prediction 146 181 - -
Gma04g01994 425 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 425 - -
Gma04g01994 425 CDD VHS 2 132 - -
Gma04g01994 425 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Gma04g01994 425 Coils Coil 187 207 - -
Gma04g01994 425 MobiDBLite consensus disorder prediction 146 164 - -
Gma04g01994 425 PANTHER TOM1-LIKE PROTEIN 1 425 IPR044836 GO:0035091|GO:0043130|GO:0043328
Gma04g01994 425 MobiDBLite consensus disorder prediction 323 425 - -
Gma04g01994 425 Pfam GAT domain 192 267 IPR004152 GO:0035091|GO:0043130
Gma04g01994 425 Pfam VHS domain 5 113 IPR002014 GO:0035091|GO:0043130
Gma04g01994 425 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Gma04g01994 425 Gene3D - 2 136 IPR008942 -
Gma04g01994 425 Gene3D - 176 275 IPR038425 -
Gma04g01994 425 MobiDBLite consensus disorder prediction 355 378 - -
Gma04g01994 425 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01994 Gma-Chr4 50347041 50363991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01994 - - gmx:100785131 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01994 04 50347041 50363991 Gma06g01423 06 13532287 13539061 GST
Gma05g01938 05 40780664 40784915 Gma04g01994 04 50347041 50363991 PCT
Gma08g00047 08 391261 396767 Gma04g01994 04 50347041 50363991 PCT
Gma04g01994 04 50347041 50363991 Gma05g01938 05 40780664 40784915 PCT
Gma04g01994 04 50347041 50363991 Gma08g00047 08 391261 396767 PCT