Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00641 ATGTCAGAAACTGACTTGGCAGTTATTAAACCTGAGATGATGAAGCCGTATGTATGGCTTCAGACTTCAGATGATTCAATCCAACAAGTGGAACAAGAAATTGCAATGTTTTCCCCACTGATATGTCAAGAAATAATACAAAAAGGCATGGGATCTTCCAAGAATTGTGCAATATGTCTTCCTCAACAAGTCAGTCCTGCCATGTTGAGCTTAATTCTCGACTATTGTCGTTTTCATCAAGTACCAGGCCGCTCAAACAAGGAACGTAAATCTTATGATGAGAAATTTGTTAGGATAGACACGGAGAGGCTTTGTGAGTTGACATCTGCTGCAGACAGCCTTCAGTTAAAACCTTTGGTTGATCTTACCAGTCGTGCACTTGCTCGAATAATTGAAGGGAAAACACCAGAGGAGATACGTGATATATTTCATTTGCCTGATGATCTTACAGAGGAAGAAAAGTTGGAGCCCTTGAGAAATATAACTGCCGACCCAAGGATCAGACTTTTGAACCGTTTGTATGCCAAAAAGAGAAAAGAACTAAAAGAGCGCGGAAGGTTAAAGAATGTTGAAGTTGAAGAAGAGCATGTGGATGAACGTTCTGTTGATGACCTTTTGTCTTTTATTAATGGAAATGATGGAGATCCAAAGGGAGTTAAAACATCAAAGAATAAAAAGAAGAACCGGAGGAAAAAAGAGCAACAGAAGAACTCTTCTCTGAAGGAGGCATCTGAAATGAACAAAAAGGAGGTAAATGGCCATGATATCAGACATCAAAGTTCTGAAGCTGAGAGAATTAGCGAGACCTCATATTTACCCTATGCAGAAGATGACACATTTTCTCCTAAGGTTGAGTTTGATGATGGTGATATAGATGATGAGATTGATCCTGCTTTAAAGGAAAAAATTGACAGGGAAGTGGAAGATTTTGCCCGCAGATTAAATTCTGACTGGCCAGAAAGAATGCAAGAACTTTTATCTTCAGGGCAAGAACGGAAGACAATGCTTTTTACTACAGATGGACTGGACTTAGAATGGAATTATGGAAATGAATCCTTACCAGAGGCTTCAACAATTTTGAGAGATGCTGGCAAGAGCAAGAAAAGTTTTGCATGGACAAATATGAGTCCCTTCGAATTCCCTTTGGCCGAACATGCCCTTGGATATGTTTTTCTTGATTTAGTCAGAACTTCCCTGTACATGGCCCTCACTTTGAACTAG 1221 0.3964 MSETDLAVIKPEMMKPYVWLQTSDDSIQQVEQEIAMFSPLICQEIIQKGMGSSKNCAICLPQQVSPAMLSLILDYCRFHQVPGRSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRDIFHLPDDLTEEEKLEPLRNITADPRIRLLNRLYAKKRKELKERGRLKNVEVEEEHVDERSVDDLLSFINGNDGDPKGVKTSKNKKKNRRKKEQQKNSSLKEASEMNKKEVNGHDIRHQSSEAERISETSYLPYAEDDTFSPKVEFDDGDIDDEIDPALKEKIDREVEDFARRLNSDWPERMQELLSSGQERKTMLFTTDGLDLEWNYGNESLPEASTILRDAGKSKKSFAWTNMSPFEFPLAEHALGYVFLDLVRTSLYMALTLN 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00641 406 SUPERFAMILY Skp1 dimerisation domain-like 90 158 IPR036296 GO:0006511
Gma07g00641 406 Coils Coil 223 249 - -
Gma07g00641 406 PANTHER SKP1 1 280 IPR016897 GO:0006511
Gma07g00641 406 Pfam Skp1 family, dimerisation domain 117 154 IPR016072 GO:0006511
Gma07g00641 406 MobiDBLite consensus disorder prediction 235 264 - -
Gma07g00641 406 Gene3D Potassium Channel Kv1.1; Chain A 12 161 IPR011333 -
Gma07g00641 406 Pfam Skp1 family, tetramerisation domain 18 80 IPR016073 GO:0006511
Gma07g00641 406 SUPERFAMILY POZ domain 16 80 IPR011333 -
Gma07g00641 406 MobiDBLite consensus disorder prediction 206 265 - -
Gma07g00641 406 PANTHER SKP1-LIKE PROTEIN 20 1 280 - -
Gma07g00641 406 SMART skp1_3 15 116 IPR001232 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00641 Gma-Chr7 6593968 6599634 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00641 - - gmx:100794666 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00641 07 6593968 6599634 Gma07g00641 07 6593968 6599634 ECH
Gma07g00641 07 6593968 6599634 Gma03g00082 03 932695 937939 ECH
Gma18g02153 18 55264710 55268285 Gma07g00641 07 6593968 6599634 PCT
Gma09g02370 09 49045567 49051970 Gma07g00641 07 6593968 6599634 PCT
Gma07g00641 07 6593968 6599634 Gma18g02153 18 55264710 55268285 PCT
Gma07g00641 07 6593968 6599634 Gma09g02370 09 49045567 49051970 PCT