Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00082 ATGTTGCTCAAGTATCATCATCCTATTGCAGAAGTCCTTTGGAAGATGTCAGAAATTGACTTGGCAGTTATTAAACCTGAGATGATGAAGCTGTATGTCTGGCTTCAGACTTCAGATGATTCAATCCAACAAGTGGAACAAGAAATTGCAATGTTTTGCCCACTGATATGTCAAGAAATAATACAAAAAGGCATGGGATCTTCCAAGAGTTGTGCAATATGTCTTCCTCAACAAGTCAGTCCTGCCATGTTGAGCTTAATTCTTGACTATTGTCGGTTTCATCAAGTACCAGGCCGTTCAAACAAGGAACGTAAATCTTATGATGAGAAATTTGTTAGGATAGACACAGAGAGGCTTTGTGAGTTGACATCTGCTGCAGACAGCCTTCAGTTAAAACCTTTGGTGGATCTTACCAGTCGTGCACTTGCTCGAATAATTGAAGGGAAAACACCGGAGGAGATACGTGATATATTTCATTTGCCTGATGATCTTACAGAGGAAGAAAAGTTGGAGCCCTTGAGAAATATAACGGCTGACCCAAGGATCAGGCTTTTGAACCGTTTGTATGCCAAAAAGAGAAAAGAACTAAAAGAGCGTGAAAGGTTAAAGAATGTTGAAGTTGAGGAAGAGCATGTTGATGAACGTTCAGTTGATGACCTTTTGTCTTTTATTAATGGAAATGATGGAGATCCAAAGGGAGTTAAAACATCAAAGAATAAAAAGAAGAACCGGAGGAAAAAAGAGCAACAGAAGAGCTCTTCTTTGAAGGAGGAATCTGAACTGAACAAAAAGGAGGTAAATGGTCATGATATCAGACACCAAAGTTCTGAAGCTGAGAGAATTAGCGAGACCTTGTATTTACCCTATGCAGATGATGACACATTTTCTCCTAAGGTTGAGTTTGATGATGGTGATATAGATGATGAGATCGATCCTGCTTTAAAGGAAAAAATTGACAGGGAAGTGGAAGATTTTGCCCGCAGATTAAATTCTGACTGGCCAGAAAGAATGCAAGAACTTTTATCTTCAGGGCAAGAACGGGAGACAATACTTTTTACTACAGATGGTTTTCTAAGGCGACATGCTTGA 1089 0.3939 MLLKYHHPIAEVLWKMSEIDLAVIKPEMMKLYVWLQTSDDSIQQVEQEIAMFCPLICQEIIQKGMGSSKSCAICLPQQVSPAMLSLILDYCRFHQVPGRSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRDIFHLPDDLTEEEKLEPLRNITADPRIRLLNRLYAKKRKELKERERLKNVEVEEEHVDERSVDDLLSFINGNDGDPKGVKTSKNKKKNRRKKEQQKSSSLKEESELNKKEVNGHDIRHQSSEAERISETLYLPYADDDTFSPKVEFDDGDIDDEIDPALKEKIDREVEDFARRLNSDWPERMQELLSSGQERETILFTTDGFLRRHA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00082 362 Coils Coil 238 258 - -
Gma03g00082 362 MobiDBLite consensus disorder prediction 250 274 - -
Gma03g00082 362 SUPERFAMILY Skp1 dimerisation domain-like 105 174 IPR036296 GO:0006511
Gma03g00082 362 MobiDBLite consensus disorder prediction 221 274 - -
Gma03g00082 362 Pfam Skp1 family, tetramerisation domain 33 95 IPR016073 GO:0006511
Gma03g00082 362 PANTHER SKP1-LIKE PROTEIN 20 16 294 - -
Gma03g00082 362 PANTHER SKP1 16 294 IPR016897 GO:0006511
Gma03g00082 362 SUPERFAMILY POZ domain 32 95 IPR011333 -
Gma03g00082 362 SMART skp1_3 30 131 IPR001232 GO:0006511
Gma03g00082 362 Pfam Skp1 family, dimerisation domain 132 169 IPR016072 GO:0006511
Gma03g00082 362 Coils Coil 185 205 - -
Gma03g00082 362 Gene3D Potassium Channel Kv1.1; Chain A 27 176 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00082 Gma-Chr3 932695 937939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00082 - - gmx:100785953 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00082 03 932695 937939 Gma03g00082 03 932695 937939 ECH
Gma07g00641 07 6593968 6599634 Gma03g00082 03 932695 937939 ECH