Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02153 ATGTCAGAAATTGACATGGCGGTTATTAAACCTGAGATGATGAAGCCTTATATCTGGCTTGAGACATCAGATGGTTCAATCCAACAAGTGGAACAAGAAATTGCAATGTATTGCCCTCTGATTTGTCAAGAAATAATACAAAAAGGCATGGGATCTTCCAAGAGTTGTGCGATATGTCTTCCTCAACGAGTCAGTCCTGTGACGTTGAGCTTAATTCTTGATTATTGTCGTTTTCATCAAGTACCAGGTCGCTCAAACAAGGAACGAAAGTCTTATGATGAGAAATTCATTAGGATGGACACAAAGCGGCTATGTGAGTTGACATCTGCTGCAGACAGCCTTCAGTTGAAGCCATTGGTTGATCTTACAAGTCGTGCACTTGCTCGGATAATTGAAGGAAAATCTCCAGAGGAGATACGTGAGATATTTCATCTGCCTGATGATCTTACTGAGGAAGAGAAGTTGGAGCCCTTGAAAAACACAACTGATGACCCAAGGATCAGGCTTTTGAATAGATTGTATGCCAAAAAGAGGAAAGAACTAAGAGAGCGTGAGAGGTTAAAGAATGTTGAAGTTGAAGAAGAGCATGTAGATGAGCGTTCAGTTGATGACCTTTTGTCTTTTATTAATGGAAATGATGGAGATCCAAAGGAAGTTAAAACTTCTAAGAATAAAAAGAAAAATAGAAGGAAAAAAGAGCAACAACAGAAGAACTCTTCTCTGAAGGAAGCTTCTGAAGTGAACAAGGAAGTAAATGGTCAAAGTATCAGACACCAAAGTGCTGAAGCTGATAGAATTGCTGAGACCTCAAATTCACATACAGAAGATGTATTTGCTCATAGAGAATTTGATGATGGAGATATAGATGATGGGATTGATCCTGCGCTAAAGGAAAAAATTGACAGCATAGTTGCAGTGGCAGATCACTAG 930 0.3925 MSEIDMAVIKPEMMKPYIWLETSDGSIQQVEQEIAMYCPLICQEIIQKGMGSSKSCAICLPQRVSPVTLSLILDYCRFHQVPGRSNKERKSYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKSPEEIREIFHLPDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELRERERLKNVEVEEEHVDERSVDDLLSFINGNDGDPKEVKTSKNKKKNRRKKEQQQKNSSLKEASEVNKEVNGQSIRHQSAEADRIAETSNSHTEDVFAHREFDDGDIDDGIDPALKEKIDSIVAVADH 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02153 309 Coils Coil 170 190 - -
Gma18g02153 309 PANTHER SKP1 1 269 IPR016897 GO:0006511
Gma18g02153 309 SMART skp1_3 15 116 IPR001232 GO:0006511
Gma18g02153 309 Gene3D Potassium Channel Kv1.1; Chain A 12 162 IPR011333 -
Gma18g02153 309 PANTHER SKP1-LIKE PROTEIN 20 1 269 - -
Gma18g02153 309 Coils Coil 224 250 - -
Gma18g02153 309 SUPERFAMILY POZ domain 16 80 IPR011333 -
Gma18g02153 309 Pfam Skp1 family, dimerisation domain 117 154 IPR016072 GO:0006511
Gma18g02153 309 SUPERFAMILY Skp1 dimerisation domain-like 90 160 IPR036296 GO:0006511
Gma18g02153 309 MobiDBLite consensus disorder prediction 240 259 - -
Gma18g02153 309 MobiDBLite consensus disorder prediction 206 290 - -
Gma18g02153 309 MobiDBLite consensus disorder prediction 261 290 - -
Gma18g02153 309 Pfam Skp1 family, tetramerisation domain 17 80 IPR016073 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02153 Gma-Chr18 55264710 55268285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02153 - - gmx:100782740 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02153 18 55264710 55268285 Gma18g02153 18 55264710 55268285 ECH
Gma18g02153 18 55264710 55268285 Gma09g02370 09 49045567 49051970 ECH
Gma18g02153 18 55264710 55268285 Gma09g02370 09 49045567 49051970 GST
Gma18g02153 18 55264710 55268285 Gma07g00641 07 6593968 6599634 PCT
Gma07g00641 07 6593968 6599634 Gma18g02153 18 55264710 55268285 PCT