Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02370 ATGTCAGAAATTGACATGGCAGTTATTAAACCTGAGATGATGAAGCCTTATATCTGGCTTGAGACATCCGATGGTTCAATCCAACAAGTGGAACAAGAAATTGCAATGTATTGCCCTCTGATTTGTCAAGAAATAATACAAAAAGGCATGGGATCTTCCAAGAATTGTGCAATATGTCTTCCTCAACGAGTCAGTCCTGCGACGTTGAGCTTAATTCTTGATTATTGTCATTTTCATCAAGTACCAGGTCGCTCAAACAAGGAACGAAAGTCTTATGATGAGAAATTCATTAGGATGGACACAAAGCGGCTATGTGAGTTGACATCTGCTGCAGACAGCCTTCAGTTAAAGCCATTGGTTGATCTTACAAGTCGTGCACTTGCTCGGATAATTGAAGGAAAATCTCCAGAGGAGATACGCGAGATATTTCATCTGCCTGATGATCTTACTGAGGAAGAGAAGTTGGAGCCCTTGAAAAACACAACTGATGACCCAAGGATCAGGCTTTTGAATAGATTGTATGCCAAAAAGAGGAAAGAACTAAAAGAGCGTGAGAGGTTAAAGAATGTTGAAGCTGAAGAAGAGCATGTAGATGAACGTTCAGTTGATGACCTTTTGTCTTTTATAAATGGAAATGATGGAGATCCAAAGGGAGTTAAAACTTCTAAGAATAAAAAGAAAAATAGAAGAAAAAAAGAGCAACAGCAGAAGAACTCTTCTCTGAAGGAAGCTTCTGAAGTGAATAAGGTTGAAGTAAATGGTCAAAATATCAGACACCAAAGTGCTGAAGCTGATAGAATTGCTGAGACCTCAAATTCACATACAGAAGACGTTTTTGCTCATAGAGAGTTTGATGATGGAGATATAGATGATGGGATTGATCCTGCATTAAAGGAAAAAATTGACAGGGAAGTGGAAGATTTTGCCCGCCGATTGAATTCTGACTGGCCAGAAAGGATGCAAGAACTTCTATCATCAGGACAAGAAAGGAAGACAATACTTTTTACTCCCAACGGAAATAGTTTTCTGAGGCGAAACGCTTTCATTTTCACTGTCATCTGGAACTCAATAAACATCTTTTCATGTACAGGACTTGACTTGGATGGATTGGAAATGAATGCGTAA 1125 0.3893 MSEIDMAVIKPEMMKPYIWLETSDGSIQQVEQEIAMYCPLICQEIIQKGMGSSKNCAICLPQRVSPATLSLILDYCHFHQVPGRSNKERKSYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKSPEEIREIFHLPDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKERERLKNVEAEEEHVDERSVDDLLSFINGNDGDPKGVKTSKNKKKNRRKKEQQQKNSSLKEASEVNKVEVNGQNIRHQSAEADRIAETSNSHTEDVFAHREFDDGDIDDGIDPALKEKIDREVEDFARRLNSDWPERMQELLSSGQERKTILFTPNGNSFLRRNAFIFTVIWNSINIFSCTGLDLDGLEMNA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02370 374 SUPERFAMILY Skp1 dimerisation domain-like 90 160 IPR036296 GO:0006511
Gma09g02370 374 Coils Coil 224 244 - -
Gma09g02370 374 PANTHER SKP1-LIKE PROTEIN 20 1 281 - -
Gma09g02370 374 SMART skp1_3 15 116 IPR001232 GO:0006511
Gma09g02370 374 Coils Coil 170 195 - -
Gma09g02370 374 Pfam Skp1 family, tetramerisation domain 17 80 IPR016073 GO:0006511
Gma09g02370 374 Gene3D Potassium Channel Kv1.1; Chain A 12 162 IPR011333 -
Gma09g02370 374 Pfam Skp1 family, dimerisation domain 117 154 IPR016072 GO:0006511
Gma09g02370 374 MobiDBLite consensus disorder prediction 205 250 - -
Gma09g02370 374 PANTHER SKP1 1 281 IPR016897 GO:0006511
Gma09g02370 374 SUPERFAMILY POZ domain 16 80 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02370 Gma-Chr9 49045567 49051970 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02370 - - gmx:100809439 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02370 09 49045567 49051970 Gma09g02370 09 49045567 49051970 ECH
Gma18g02153 18 55264710 55268285 Gma09g02370 09 49045567 49051970 ECH
Gma18g02153 18 55264710 55268285 Gma09g02370 09 49045567 49051970 GST
Gma09g02370 09 49045567 49051970 Gma07g00641 07 6593968 6599634 PCT
Gma07g00641 07 6593968 6599634 Gma09g02370 09 49045567 49051970 PCT