Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01663 ATGGAATACCAATACCACCCATCATCTTATGGCGTCTCTTCCTCTTCTCACTCCAACCACCATCAACAAGGGTCAACAACACCGAAATCCCTCTCTTCACAACGCAGCCTCGTCTCAGTCCCCTCCCTCAACCACCACCACCACCTCCACACCCCGAATTCCACCGTCTACCACCACTGCCTCACAACCCTCAAGGGTCACACCTCCTCCTACATCTCCTCCTTAACCCTCTCCGGCAAATTCCTCTACACCGGCTCCTCCGACCGCGAAATCCGCTCCTGGAACCGCATCCCAGAAAACTCATCAAACAACAATAACAATAGCAACACCGTACTCACGGGAAACGGTGCTGTTAAGTCGTTAGTAATTCAGTCAAACAAACTTTTCAGCGCGCATCAAGACCACAAAATCTGTGTCTGGAAAATAAGCACTAACAACAACAACGATAACGATCATGACCAGAAATATACACACGTGGCCACACTCCCCACCCTCGGCGACCGCGCCTCGAAAATCTTGATCCCCAAGAACCAGGTACAAATCCGAAGGCACAAGAAATGCACCTGGGTTCACCACGTGGACACCGTCTCGGCTTTGGCCCTGTCCAGAGACGGAACCTTGCTGTACTCTGTCTCTTGGGACAGAACGCTCAAAATCTGGAAAACGAAAGACTTCACGTGCCTGGAGTCCCTCGCCAACGCGCACGACGACGCCATCAACGCTGTCGCAGTCTCCTACGATGGGCGCGTCTACACCGGATCAGCGGACAAGAAAATCAAGGTGTGGAAGAAATTCGCAGGAGAAAAGAAACACACTTTAATAGAAACCTTGGAGAAGCACAACTCTGGGGTTAATGCTTTGGCTCTAAGCAGCGACGAGAATGTTGTATATTCTGGTGCATGCGATAGGGCTATTTTGGTTTGGGAGAAGAAAGAGGGTGATGATGGGAAAATGGGGGTGGTGGGTGCTTTAAGGGGACACACCAAGTCCATTTTGTGTTTATCTGTTGTGGCGGATTTGGTGTGTAGTGGCTCTGCGGATACAACGATTAGGATTTGGAGAGGTTGTGTTGATTCGCATGAATACTCTTGTTTAGCGGTTTTGGAAGGGCACAGGGCTTCGATTAAGTGCATAAGCGCAGTGGTTGACTGCAACAACAACAACAACAACACATCGCAGTCCGAAGCATTATTATCTTTTCTAGTCTATAGTGGCGGTTTGGACTGCGACATTAAGGTGTGGCAGATTTTACTTCCGGCTAGCTAA 1266 0.4961 MEYQYHPSSYGVSSSSHSNHHQQGSTTPKSLSSQRSLVSVPSLNHHHHLHTPNSTVYHHCLTTLKGHTSSYISSLTLSGKFLYTGSSDREIRSWNRIPENSSNNNNNSNTVLTGNGAVKSLVIQSNKLFSAHQDHKICVWKISTNNNNDNDHDQKYTHVATLPTLGDRASKILIPKNQVQIRRHKKCTWVHHVDTVSALALSRDGTLLYSVSWDRTLKIWKTKDFTCLESLANAHDDAINAVAVSYDGRVYTGSADKKIKVWKKFAGEKKHTLIETLEKHNSGVNALALSSDENVVYSGACDRAILVWEKKEGDDGKMGVVGALRGHTKSILCLSVVADLVCSGSADTTIRIWRGCVDSHEYSCLAVLEGHRASIKCISAVVDCNNNNNNTSQSEALLSFLVYSGGLDCDIKVWQILLPAS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01663 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 277 309 IPR001680 GO:0005515
Gma06g01663 421 CDD WD40 60 415 - -
Gma06g01663 421 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 14 419 IPR045182 -
Gma06g01663 421 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 324 353 - -
Gma06g01663 421 SMART WD40_4 270 309 IPR001680 GO:0005515
Gma06g01663 421 SMART WD40_4 361 415 IPR001680 GO:0005515
Gma06g01663 421 SMART WD40_4 182 221 IPR001680 GO:0005515
Gma06g01663 421 SMART WD40_4 317 354 IPR001680 GO:0005515
Gma06g01663 421 SMART WD40_4 224 263 IPR001680 GO:0005515
Gma06g01663 421 SMART WD40_4 105 141 IPR001680 GO:0005515
Gma06g01663 421 SMART WD40_4 57 95 IPR001680 GO:0005515
Gma06g01663 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 189 230 IPR001680 GO:0005515
Gma06g01663 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 324 353 IPR001680 GO:0005515
Gma06g01663 421 SUPERFAMILY WD40 repeat-like 59 416 IPR036322 GO:0005515
Gma06g01663 421 Gene3D - 30 171 IPR015943 GO:0005515
Gma06g01663 421 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 232 263 - -
Gma06g01663 421 Pfam WD domain, G-beta repeat 60 95 IPR001680 GO:0005515
Gma06g01663 421 Pfam WD domain, G-beta repeat 275 308 IPR001680 GO:0005515
Gma06g01663 421 Pfam WD domain, G-beta repeat 190 221 IPR001680 GO:0005515
Gma06g01663 421 Pfam WD domain, G-beta repeat 363 414 IPR001680 GO:0005515
Gma06g01663 421 Pfam WD domain, G-beta repeat 227 263 IPR001680 GO:0005515
Gma06g01663 421 Pfam WD domain, G-beta repeat 322 353 IPR001680 GO:0005515
Gma06g01663 421 PANTHER SIMILARITY TO GTP-BINDING REGULATORY PROTEIN AND WD-REPEAT PROTEIN 14 419 - -
Gma06g01663 421 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 189 221 - -
Gma06g01663 421 MobiDBLite consensus disorder prediction 7 39 - -
Gma06g01663 421 MobiDBLite consensus disorder prediction 1 39 - -
Gma06g01663 421 Gene3D - 175 418 IPR015943 GO:0005515
Gma06g01663 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 232 272 IPR001680 GO:0005515
Gma06g01663 421 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 277 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01663 Gma-Chr6 16541741 16543025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01663 234 368 Acyl Lipid Metabolism Gene Families AT3G18860 27.397 8.56e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01663 - - gmx:100815608 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01663 06 16541741 16543025 Gma04g01731 04 46680216 46681469 ECH
Gma06g01663 06 16541741 16543025 Gma06g01663 06 16541741 16543025 ECH
Gma04g01731 04 46680216 46681469 Gma06g01663 06 16541741 16543025 GST
Gma17g00875 17 7443993 7445313 Gma06g01663 06 16541741 16543025 PCT
Gma05g00323 05 2979393 2980684 Gma06g01663 06 16541741 16543025 PCT
Gma06g01663 06 16541741 16543025 Gma17g00875 17 7443993 7445313 PCT
Gma06g01663 06 16541741 16543025 Gma05g00323 05 2979393 2980684 PCT