Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02093 ATGACGTCTCTAACAAGTTATGAAGTAGTAGTTTTATTATCCGGTGTGCGGTGGAACCTGATAAAGTCTGGCATTGACACTCAGATGGATTCTAAGGCATTGCCAAGCTCCAGTTTAAAGACTGCAAAGTCTCCTCATAATTCTACAGGGCCAGGATCTGGTGGGTCTGACACTGATGGTGTGACTTTGAGAGAATGGTTGAAATCTAGGCACTGCAAAGGGAGCAAAACAGATCATTTAAGTATATTTAGAAAAATTGTGGATTTGGTTGATGGTTCTCACTCTGAGGGAGTTGCAATGCACAATCTGTACCCTTCTCATATTAAATTGTTACCATCAAACCAGGTTATGTACCTTGGGTTGCCTACTCAGAAACAGACATTAGATAGTATTGCAAATTCTGAAGTTCTTCAGCTAGAGAATTCTTTTATTAGGAAAAGGCTGTCAGAGAAGGTAATATCTGCCTCTCTTAATTTGCGGTCGAAGAAACAGAAATTCAATGAAAATGCTAGAGTTGCTGGTGATTGGAGTCAATGCCCTCCAAGGACTGACTTGAATCTTCAAATTGCCAATGATATTAAAGTCAATGCGGTGGGATCACAAGATTATTGCAATGAATACAAGGAAGATATCCAATTTTCTAAACATAATATGCGGAGCATGTCTCGCATCCCTCACATATTTAATGCAGGTCAATTGCAATTGAATTCTTTAAATGAAAGATTGGAAGATAAATGGTATTCAAGTCCTGAGGGTGGTTGCACAACATCATCAAATATCTACTGTCTGGGAGTCCTTCTTTTTGAGTTACTTAATGATTTTGACTCAGAAAGAGCACATATTGCTGCAATGTCTGATCTTGGTCGTAGGATTCTTCCTTCAGTTTTCCTTTCAGAGTATCCTATGGAGGCAGGATTTTGCCTTTGGATGATGCATCCTGAACCATCATCACGTCCAACAATAAGGGAGATCCTACAATCTGAAGTGATTAATGGAATGCGGGAGGTGTACTTTGAGGAATTATCATTAAGTCTTAATCAAGATGATGCAGAATCAGAATTGCTATTGCATTTCCTCATCTCACTAGAAGAGCAGAAGCACATGGATTCCAACAAATTGGCAGAAGAAATAAGATGCTTGGAATCAGATGTAAAAGAGGTTGAGAGGAGACATGACTTGAGAAAATCCTTGCTTCCCTCAAGCTTGCAGAACGACTCCTCTCTTCAAATAGAGAATGTGTCTCTTCTTAAAGAATCTTCAAGTTCAGAAACATTACCACCAGTATCCACAATTTCTAATGCAAATGAACTGAGATTGATGAAAAATATGTGCCTACTTGAAAGTGCTTACTTTTCCATGAGATCAAACATTAAGCTTCCTGAAACAGATACTGCAACTCACCCAGATAAAGATATACTGAGAAATCATGACAATTGGTGTGTAGCTCAAAAAGACATGGAACAACATAAGACGACAGATACTTTAGGAGCTTTCTTTGATGGTTTGTGCAAGTCCACACGTTATAGCAAGTTTGAAGTGCGGGGCATAGTAAGAAATACTGATTTTAACAATCCTGCAAATGTAATCTGCTCTCTGAGTTTTGATAGGGATGAAGACTACTTTGCTGCTGCTGGGATATCAAAGAAAATTAAAATTTTTGAGTTCAATGCACTTTTCAATGACTCCATTGACATCCATTATCCTGTAGTTGAGATGTCAAACAGATCAAGGCTCAGTTGTGTTTGCTGGAATAACTATATCCAGAACTATCTTGCCTCGACAGACTATGATGGTGCAGTGAAGCTATGGGATGCTAACACAGGCCAGGGGTTTTCTGGATTCACCGAACATGAAAAGAGGGCTTGGTCTGTTGATTTCTCTTTGGTATGCCCTACTAAATTTGTTAGTGGGAGTGATGATTGTTCTGTGAAACTGTGGAGTATCAATGAGAAAAAGAGTTTAGCCACAATCAGGAATGTTGCTAATGTCTGCTGTGTTCAGTTCTCTACTCATTCCTCTCATTTGCTGGCCTTTGGATCTGCTGATTACTCAGCATATTGCTATGATCTTCGCAATCTTAGAAGCCCTTGGTGTGTGTTGGCTGGCCATCGTAAAGCTGTAAGCTACGTCAAATTCTTGGACTCTGAGACACTTGTTTCTGCATCAACCGATAATATGTTGAAGATCTGGGATCTCAATAAAACCTCTCCTGTGGGTCTATCAACTAGTGCTTGCAGCTTAACCTTGTCAGGACATACTAATGAGAAGAATTTTGTGGGTTTATCAGTTGCTGATGGATATATAGCATGTGGTTCAGAAACAAATGAGGTTTTTGCCTACTATAAATCACTTCCAATGCCAGTCACTTCGCACAGGTTTGGGTCCATTGATCCTATTTCTGGTAAAGAGACAGATGTTGACAATGGTCTGTTTGTTTCAAGTGTGTGCTGGAGAGAGAAATCAGACATGGTTATTGCTGCCAATTCAAGTGGATGTATAAAAGTTCTACAGATGGTTTGA 2520 0.3944 MTSLTSYEVVVLLSGVRWNLIKSGIDTQMDSKALPSSSLKTAKSPHNSTGPGSGGSDTDGVTLREWLKSRHCKGSKTDHLSIFRKIVDLVDGSHSEGVAMHNLYPSHIKLLPSNQVMYLGLPTQKQTLDSIANSEVLQLENSFIRKRLSEKVISASLNLRSKKQKFNENARVAGDWSQCPPRTDLNLQIANDIKVNAVGSQDYCNEYKEDIQFSKHNMRSMSRIPHIFNAGQLQLNSLNERLEDKWYSSPEGGCTTSSNIYCLGVLLFELLNDFDSERAHIAAMSDLGRRILPSVFLSEYPMEAGFCLWMMHPEPSSRPTIREILQSEVINGMREVYFEELSLSLNQDDAESELLLHFLISLEEQKHMDSNKLAEEIRCLESDVKEVERRHDLRKSLLPSSLQNDSSLQIENVSLLKESSSSETLPPVSTISNANELRLMKNMCLLESAYFSMRSNIKLPETDTATHPDKDILRNHDNWCVAQKDMEQHKTTDTLGAFFDGLCKSTRYSKFEVRGIVRNTDFNNPANVICSLSFDRDEDYFAAAGISKKIKIFEFNALFNDSIDIHYPVVEMSNRSRLSCVCWNNYIQNYLASTDYDGAVKLWDANTGQGFSGFTEHEKRAWSVDFSLVCPTKFVSGSDDCSVKLWSINEKKSLATIRNVANVCCVQFSTHSSHLLAFGSADYSAYCYDLRNLRSPWCVLAGHRKAVSYVKFLDSETLVSASTDNMLKIWDLNKTSPVGLSTSACSLTLSGHTNEKNFVGLSVADGYIACGSETNEVFAYYKSLPMPVTSHRFGSIDPISGKETDVDNGLFVSSVCWREKSDMVIAANSSGCIKVLQMV 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02093 839 MobiDBLite consensus disorder prediction 34 56 - -
Gma05g02093 839 ProSitePatterns Trp-Asp (WD) repeats signature. 591 605 IPR019775 -
Gma05g02093 839 Gene3D Transferase(Phosphotransferase) domain 1 59 339 - -
Gma05g02093 839 Coils Coil 370 390 - -
Gma05g02093 839 ProSiteProfiles Trp-Asp (WD) repeats profile. 571 613 IPR001680 GO:0005515
Gma05g02093 839 ProSiteProfiles Trp-Asp (WD) repeats profile. 614 656 IPR001680 GO:0005515
Gma05g02093 839 MobiDBLite consensus disorder prediction 34 60 - -
Gma05g02093 839 SMART WD40_4 650 689 IPR001680 GO:0005515
Gma05g02093 839 SMART WD40_4 515 554 IPR001680 GO:0005515
Gma05g02093 839 SMART WD40_4 742 781 IPR001680 GO:0005515
Gma05g02093 839 SMART WD40_4 607 647 IPR001680 GO:0005515
Gma05g02093 839 SMART WD40_4 693 731 IPR001680 GO:0005515
Gma05g02093 839 SMART WD40_4 565 604 IPR001680 GO:0005515
Gma05g02093 839 SMART WD40_4 789 837 IPR001680 GO:0005515
Gma05g02093 839 SUPERFAMILY Protein kinase-like (PK-like) 238 341 IPR011009 -
Gma05g02093 839 PANTHER PROTEIN SPA1-RELATED 2 23 839 IPR044630 GO:0009640
Gma05g02093 839 Gene3D - 499 839 IPR015943 GO:0005515
Gma05g02093 839 Pfam WD domain, G-beta repeat 614 647 IPR001680 GO:0005515
Gma05g02093 839 Pfam WD domain, G-beta repeat 699 731 IPR001680 GO:0005515
Gma05g02093 839 PRINTS G protein beta WD-40 repeat signature 591 605 IPR020472 -
Gma05g02093 839 PRINTS G protein beta WD-40 repeat signature 634 648 IPR020472 -
Gma05g02093 839 PRINTS G protein beta WD-40 repeat signature 718 732 IPR020472 -
Gma05g02093 839 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 700 733 - -
Gma05g02093 839 PANTHER PROTEIN SPA1-RELATED 2 23 839 - -
Gma05g02093 839 SUPERFAMILY WD40 repeat-like 522 836 IPR036322 GO:0005515
Gma05g02093 839 ProSitePatterns Trp-Asp (WD) repeats signature. 718 732 IPR019775 -
Gma05g02093 839 ProSiteProfiles Trp-Asp (WD) repeats profile. 700 740 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02093 Gma-Chr5 42212237 42218887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02093 634 777 Miscellaneous Gene Families AT5G08390 29.452 5.50e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02093 K16240 - gmx:100813452 1670.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02093 05 42212237 42218887 Gma05g02093 05 42212237 42218887 ECH
Gma05g02093 05 42212237 42218887 Gma08g00201 08 1746497 1754501 GST
Gma01g02244 01 57633140 57641558 Gma05g02093 05 42212237 42218887 PCT
Gma11g00170 11 1315640 1324402 Gma05g02093 05 42212237 42218887 PCT