Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02244 ATGGATGAAGACTTTGTTGATGAGGCAACCCAATTAGAAGTTGCCGAGGAATCACAGCGCCAAAACAAAGATTCACCCCACCCGGAATGCCGAAAAATCTTAAAATCCCTAGAAGCCTTCATCCCTGTTAAGCAGGACTACTCCCAGATACCACCTCGGGAATATGATGGCATTCTACATGGTAAAAATGTAGTTGAAGGTATTGATCATGCAGATACATCACAGCATCCTCATGTAAGCCTTTTTATGGATGATGCTGATGTTATGGTTGAAGAGTTAACAGTAAAAAGTTACAATGGCTCAAGTTTGGATATTGGTACATCAAACAACCGAGAGCAGATATATAATCGGCAGAACCATTGGCAAAATCTTTATCAGCTAGCAAGTAATTCAGGAATTGGAAATTCACTAAGTGATATTGGAACCAGAAACAGTGTCCCAGCTACATCTAGTGCTCGGGAGGATATTGGATCCTCATCTTTCCCTGAGATGTTAGCTAGAAAATCTCTCAGTGATGGCCAGAGCAATGTCATGGAACACTTGGCATCTGCTGAAAATAAAGAGGGTGCAGGTGATGTTCGTCAAGGAACACGGAAAAAAATTATATCCCAATCAGGATTTGCTGAGTTTTTCATAAAAAATACACTGAGGGGTAAGGGTATTGTATATAAAGGTCCATCTTCTGATGGCTTCTGTGTTCAGTCCAGAGAGCAAAACTGGAtgaagattggcattgatgcagatcagaataggatgaaaactggcattggtgcggatcagaatcggctgaagactgtcattgatgcggatcagaatcagctaaagactggcattgatgcggatcagaatcggctaaagactggcattgatgcagaccagaatcagatgaaggctagcattggcacagatcagaatcagatgaagaatcacagtggtactgatcagaaacagatgaagactggcattgTTACTCACTTGAACTCTAATCAATCAGTGGGCTATGGTTCCAAAACTGCAAAGTTTCCTTCTTATTGTGGTGCTATGCCTAGATCTGGCAGGTCTGATTGTGTTGGTGTGACTTTGAGAGAATGGTTGAAACACGGGCACCACAAAGCAAGCAAGGTGGAAAGTTTGAATATATTTAGAAAGATTGTGGATTTGGTGGACATTTGTCACTCTCAGGGAGTTGCATTGCATAACCTGTGTCCATCTTATATTAAATTGTCGCCATCAAACCAGATCATGTACCTTGGTTTACCTGTTCAAAAACAGATGGTGGATAGTGTTGTAAATTCTGAAGTTGTTCACTTAGATAATTCTTTTATTAGAAAAAGGCTGTCAGAGCAAGTAACATTTCCCTCCCTTGATATGGGGTCAAAGAAAAAAAAATTTAATGAGAATGTGAGAGTTACTGGTGGTGACTTGTGCCTCGAAACTGCAAGTGATAGGAAACTTCATAGTCATACAGTTGGATCACAAGATTATTACAATGAATATGAGGAAGGTACCCAATTTTCTAAATATAACATTGGAAGAATGTCTAGCATCCCTCGCGTATCTAATGCAGGTCAAATGCCATTGACTTCATGTGAAAAATTTGAAAATAAATGGTACACAAGTCCTGAGGGAGGTTACACAACATCATCAAATATCTATTGTCTTGGTGTTCTCCTTTTTGAGTTACTTGGTCATTTTGACTCTGAAAGAACACATATTGCAGCCATGTCTGATCTTCGTCATAGGATTCTTCCTCCAATTTTCCTATCAGAAAATCCTAAGGAAGCTGGCTTTTGTCTTTGGTTGTTGCATCCTGAACCATCATCACGCCCATCAACAAGGGAAATCCTTCAATCTGAATTGATTAATGGATTGCAAGAGTTGTTTAGTGAGGAATTGTCATCAAGTATTGACCAAGAAGATGCAGAATCTGAATTGTTATTGCATTTCCTCGTTTTGTTAAAAGAGCAGAAGCAGAACAATGCCTTCAAACTGGTAGAAGAAATCAAGTGCTTGGAATCAGATATAGAAGAGGTGGAGAGGAGGCATGACTCAAGAAAATCCTTGGTTTCCTCAGGCTTGCAGAATGATTACTCTTGTCAGAAAGAGATTATGCCTCTTAAAAAGGAATCTTTGAGTTTGGAAATGCTGCCCTCGATATCCCCAATCTCTAATTCAAATAAAGTGAGATTGATGAGAAGTATATGCCATCTTGAAGGTGCTTATTTTTCCACGAGATCCAAACTTCAGCTTTCTGAAACAGATGCTTCAACTCACCCTGATAAAGATATACTAAGAAATCGTGAGAACCAGAATGTGGCCCAAAAAAGCGAGGAACAACCTAAGAAAGATACTTTAGGGGTATTCTTTGATGGTTTGTGCAAGTATGCACGTTATTGCAAGTTTGAAGTGCGGGGTGTACTAAGAAATGTTGATTTTAACAATCCTGCAAATGTAATTTGCTCTCTAAGCTTTGACCGGGATGCAGATTACTTTGCTTCTGCTGGGATATCTAGGAAAATAAAAATTTTCGAGTTTAGTGCACTTTGCAATGACTCTGTTGATATCCATTATCCTGCGGTTGAGATGTCAAACAGATCAAAACTCAGCTGTGTTTGCTGGAATAACTATATTAAGAACTATCTCGCTTCTACAGATTATGACGGTATAGTGAAGTTATGGGATGCTAGTACAGGTCAAGAATTTTCTCAATTCACTGAACATGAGAAGAGGGCTTGGTCTGTTGACTTCTCTGCAGTATGCCCTACAAAATTTGCCAGTGGAAGTGATGATTGTACTGTCAAGCTGTGGAGCATCAGTGAGAGAAACTGTTTAGGCACAATCAGGAATGCTGCTAATGTCTGCTGTGTTCAGTTCTCTGCTCATTCCTCCCATTTGCTGGCCTTTGGATCTGCGGATTACTCAACATATTGTTATGATCTTCGCAATCTTAGAAGTCCCTGGTGTGTACTGGCTGGCCATCGTAAAGCTGTGAGCTATGTCAAATTCTTGGACTCTGAAACACTTGTTTCTGCTTCTACTGATAATACATTGAAGATCTGGGATCTCAATAAAACCTCTCCTGTGGGTGCATCCATTAATGCTTGCAGCCTAACTCTGTCGGGACATACTAATGAGAAGAATTTTGTGGGTCTATCGGTGGCTGATGGATATATTGCATGTGGTTCAGAAACAAATGAGGTTTACACCTACTATAGATCGCTTCCCATGCCAGTCACTTCACACAAATTTGGGTCCATTGATCCCATTTCTGGTAAAGACACTGATGATGACAATGATGGTTTAAAGAAAAGGTTCCATGTGACGGCGACTTTCTTACATTTGCGAGTTCCTGGAGTTTTGCGCTTGTCACTCAAGCACTCTGGCCAATCCCATCAACCTGCTGGGAGCATATAA 3414 0.372 MDEDFVDEATQLEVAEESQRQNKDSPHPECRKILKSLEAFIPVKQDYSQIPPREYDGILHGKNVVEGIDHADTSQHPHVSLFMDDADVMVEELTVKSYNGSSLDIGTSNNREQIYNRQNHWQNLYQLASNSGIGNSLSDIGTRNSVPATSSAREDIGSSSFPEMLARKSLSDGQSNVMEHLASAENKEGAGDVRQGTRKKIISQSGFAEFFIKNTLRGKGIVYKGPSSDGFCVQSREQNWMKIGIDADQNRMKTGIGADQNRLKTVIDADQNQLKTGIDADQNRLKTGIDADQNQMKASIGTDQNQMKNHSGTDQKQMKTGIVTHLNSNQSVGYGSKTAKFPSYCGAMPRSGRSDCVGVTLREWLKHGHHKASKVESLNIFRKIVDLVDICHSQGVALHNLCPSYIKLSPSNQIMYLGLPVQKQMVDSVVNSEVVHLDNSFIRKRLSEQVTFPSLDMGSKKKKFNENVRVTGGDLCLETASDRKLHSHTVGSQDYYNEYEEGTQFSKYNIGRMSSIPRVSNAGQMPLTSCEKFENKWYTSPEGGYTTSSNIYCLGVLLFELLGHFDSERTHIAAMSDLRHRILPPIFLSENPKEAGFCLWLLHPEPSSRPSTREILQSELINGLQELFSEELSSSIDQEDAESELLLHFLVLLKEQKQNNAFKLVEEIKCLESDIEEVERRHDSRKSLVSSGLQNDYSCQKEIMPLKKESLSLEMLPSISPISNSNKVRLMRSICHLEGAYFSTRSKLQLSETDASTHPDKDILRNRENQNVAQKSEEQPKKDTLGVFFDGLCKYARYCKFEVRGVLRNVDFNNPANVICSLSFDRDADYFASAGISRKIKIFEFSALCNDSVDIHYPAVEMSNRSKLSCVCWNNYIKNYLASTDYDGIVKLWDASTGQEFSQFTEHEKRAWSVDFSAVCPTKFASGSDDCTVKLWSISERNCLGTIRNAANVCCVQFSAHSSHLLAFGSADYSTYCYDLRNLRSPWCVLAGHRKAVSYVKFLDSETLVSASTDNTLKIWDLNKTSPVGASINACSLTLSGHTNEKNFVGLSVADGYIACGSETNEVYTYYRSLPMPVTSHKFGSIDPISGKDTDDDNDGLKKRFHVTATFLHLRVPGVLRLSLKHSGQSHQPAGSI 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02244 1137 MobiDBLite consensus disorder prediction 752 778 - -
Gma01g02244 1137 PANTHER PROTEIN SPA1-RELATED 2 1 1099 IPR044630 GO:0009640
Gma01g02244 1137 ProSitePatterns Trp-Asp (WD) repeats signature. 1008 1022 IPR019775 -
Gma01g02244 1137 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 990 1023 - -
Gma01g02244 1137 SMART WD40_4 1032 1071 IPR001680 GO:0005515
Gma01g02244 1137 SMART WD40_4 940 979 IPR001680 GO:0005515
Gma01g02244 1137 SMART WD40_4 800 844 IPR001680 GO:0005515
Gma01g02244 1137 SMART WD40_4 897 937 IPR001680 GO:0005515
Gma01g02244 1137 SMART WD40_4 983 1021 IPR001680 GO:0005515
Gma01g02244 1137 SMART WD40_4 854 894 IPR001680 GO:0005515
Gma01g02244 1137 MobiDBLite consensus disorder prediction 13 28 - -
Gma01g02244 1137 ProSiteProfiles Trp-Asp (WD) repeats profile. 861 903 IPR001680 GO:0005515
Gma01g02244 1137 PANTHER PROTEIN SPA1-RELATED 2 1 1099 - -
Gma01g02244 1137 SUPERFAMILY WD40 repeat-like 813 1083 IPR036322 GO:0005515
Gma01g02244 1137 MobiDBLite consensus disorder prediction 1 28 - -
Gma01g02244 1137 SUPERFAMILY Protein kinase-like (PK-like) 356 627 IPR011009 -
Gma01g02244 1137 ProSitePatterns Trp-Asp (WD) repeats signature. 881 895 IPR019775 -
Gma01g02244 1137 PRINTS G protein beta WD-40 repeat signature 881 895 IPR020472 -
Gma01g02244 1137 PRINTS G protein beta WD-40 repeat signature 924 938 IPR020472 -
Gma01g02244 1137 PRINTS G protein beta WD-40 repeat signature 1008 1022 IPR020472 -
Gma01g02244 1137 Coils Coil 654 681 - -
Gma01g02244 1137 Pfam WD domain, G-beta repeat 899 937 IPR001680 GO:0005515
Gma01g02244 1137 Pfam WD domain, G-beta repeat 989 1021 IPR001680 GO:0005515
Gma01g02244 1137 ProSiteProfiles Trp-Asp (WD) repeats profile. 904 946 IPR001680 GO:0005515
Gma01g02244 1137 ProSiteProfiles Trp-Asp (WD) repeats profile. 990 1030 IPR001680 GO:0005515
Gma01g02244 1137 MobiDBLite consensus disorder prediction 754 778 - -
Gma01g02244 1137 Gene3D - 789 1110 IPR015943 GO:0005515
Gma01g02244 1137 Gene3D Transferase(Phosphotransferase) domain 1 357 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02244 Gma-Chr1 57633140 57641558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02244 821 966 Miscellaneous Gene Families AT5G08390 26.000 7.15e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02244 K16240 - gmx:100784300 2200.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02244 01 57633140 57641558 Gma01g02244 01 57633140 57641558 ECH
Gma01g02244 01 57633140 57641558 Gma11g00170 11 1315640 1324402 GST
Gma01g02244 01 57633140 57641558 Gma05g02093 05 42212237 42218887 PCT
Gma01g02244 01 57633140 57641558 Gma08g00201 08 1746497 1754501 PCT