Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00274 ATGGGTACTTTACAGTGCTTTTCGGTTGAAGGAGATGAAAAACCAAGAAAGTTATCCAAACTTTCAGATGATCCTCAGGAGGAGGAGGAGGGTATGCAGATTGATATGGTTTCTCTTTTCCCTTCCCAGCACCAAAGCAATGATCAAAACCATGCACCCATGGCAATTGAGGAGCGTGATCCAAGATGGCTTATTAACCAGGATGTCTCAATCGGTGTTGTCCTACGCTTGTCAAGGTCTGAGTATGGTTCAATTGTCTCACTGAACCAGAGTTTCCGGTCCCTGATTCAGACCGGAGAACTCTATCGGCTCAGAAGGAAAATGGGAATTGTAGAATACTGGGTTTACTTCTCTTTCAATCTTCTTGAATGGGAGGTGTTTGATCCAATGAATGGCTATTGGATGAAATTGCCTAGAATGCCTTCCAATCAGTATGACTGCTTCACGTTTTCGGATAAGGAGTCTTTGGCTGTTGGCACAGAACTTCTTGTGTTTGGAAAGGCAATAGAGGCTCCTGTTGTTTATGGATACAGCCTCTTGACCCACACTTGGTCACATGGTACTCAGATGAGTGTTCCTAGATGCTTGTTTGCATCTGCGAGCCGCGGAGAAATAGCCATAGTGGCTGGTGGGTGTAATCCACTAGGCAAGATCCTGAGTGTGGCTGAGATGTATAACTCAGACACCAAGACATGGGAGGCTCTCCCAAACATGAACAAAGCAAGGAAGATGAGTGCTGGTGTGTTCATGGATGGGAAATTTTATGCCCTTGGTGGAATGGGAGAAGATGGTAATAAGCTGACATGTGGTGAGGAGTATGATTTGGAGACAAAGGAATGGCGTGTGATCCCTAACATGCTCCCTCCGCGAACAAGCGAAAGACAAGACACTACTGAGGCACCACCTTTGGTTGCAGTTGTGAACAATGTGTTGTACGCTGCAGATTATGCTCAGAGGGTGCTGAGGCGGTATGAGAAAGAGAGGAACAAATGGGTCTACATTGGAAGTCTTCCTGAGATAACATCCTCTATGAATGGTTGGGGATTAGCATTTCGAGCATGTGGAGATCGAATAGTTGTTATTGCTGGGGAAAGTGCTCATGGTGGAAGGGTGGTTGAAATTAATTCTTGGATCCCAGATGGAGGTGCACCACTGTGGAACTTGCTTGCCAGAAGGCACATTGGTGGGAGCTTTGTGTATAATTGCGCAGTGATGGGATGCTGA 1224 0.4608 MGTLQCFSVEGDEKPRKLSKLSDDPQEEEEGMQIDMVSLFPSQHQSNDQNHAPMAIEERDPRWLINQDVSIGVVLRLSRSEYGSIVSLNQSFRSLIQTGELYRLRRKMGIVEYWVYFSFNLLEWEVFDPMNGYWMKLPRMPSNQYDCFTFSDKESLAVGTELLVFGKAIEAPVVYGYSLLTHTWSHGTQMSVPRCLFASASRGEIAIVAGGCNPLGKILSVAEMYNSDTKTWEALPNMNKARKMSAGVFMDGKFYALGGMGEDGNKLTCGEEYDLETKEWRVIPNMLPPRTSERQDTTEAPPLVAVVNNVLYAADYAQRVLRRYEKERNKWVYIGSLPEITSSMNGWGLAFRACGDRIVVIAGESAHGGRVVEINSWIPDGGAPLWNLLARRHIGGSFVYNCAVMGC 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00274 407 MobiDBLite consensus disorder prediction 1 30 - -
Gma05g00274 407 Pfam Kelch motif 193 239 IPR006652 GO:0005515
Gma05g00274 407 Pfam Kelch motif 241 286 IPR006652 GO:0005515
Gma05g00274 407 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 26 407 - -
Gma05g00274 407 SMART kelc_smart 205 252 IPR006652 GO:0005515
Gma05g00274 407 SMART kelc_smart 253 300 IPR006652 GO:0005515
Gma05g00274 407 SUPERFAMILY Kelch motif 117 391 IPR015915 GO:0005515
Gma05g00274 407 MobiDBLite consensus disorder prediction 10 27 - -
Gma05g00274 407 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 26 407 - -
Gma05g00274 407 Gene3D - 104 383 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00274 Gma-Chr5 2471333 2472556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00274 68 285 EF-hand Containing Proteins AT4G39560 24.775 8.25e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00274 - - gmx:100791318 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00274 05 2471333 2472556 Gma17g00928 17 7929213 7930439 ECH
Gma05g00274 05 2471333 2472556 Gma05g00274 05 2471333 2472556 ECH
Gma17g00928 17 7929213 7930439 Gma05g00274 05 2471333 2472556 GST
Gma01g00413 01 5138691 5141702 Gma05g00274 05 2471333 2472556 PCT
Gma02g00965 02 10250074 10254052 Gma05g00274 05 2471333 2472556 PCT