Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00965 ATGTTGGACGGTCGTTCCTGCGTTGTTCCGAGGTTGTTTTCCGGCACTTGCCAGGCGGAGAACGAATGGTCTTACATGAAGTGCTTGCTGGAGTTGGACATCAAGAATGGCAAACGCCCTATGGGGATTGATGATGTTGAGGAGGATGAGCCCCACCAGCCAAGGAAGTGTACTAAGAAGTTGGATTCTTGCCATAGAGTTGAAATGGCTCGAATTTCATTTCAACGGCAATCTATTGAGGCCAAGGATTCTGTAGTTGTTCCCCCTTTGGATCAAGAGACCATTGAGCCATTGAGTGTTTGTCAAGGAGTTGTTGGAGAAGAAGGAGCTTTGACTGACCGGCTATTGTGTGAGAAAGAACATGAGGGTGATGGTGATTTGATGGATTTTGGTGACCATCAATCTGATAAACAGCAGCAGGCTCAGCCGGGGGATTTGTCAGATTTCGGTGTTCGGCTATTTGATGAAGATCAGTTGCAGCATGATGATAATTTATTGAATTTGAGTGAGCAGCAATCCGAGGGGCGGCAGCAGCAGCACCACCATGGTGGGGATTCTTCGGATTCCAGTTCTCTCTTGCCACGCATGAACCGGGACAGCTCAATCACCTGTCTCAGCCGCTGTTCGAGGTCAGATTATGGTTCTCTCGCCTCGCTGAATAGGAGCTTCCGGAACATAATCCGAAGTGGTGAGCTCTATCAATGGAGGAGACTGAATGGTATCATGGAGCACTGGATTTATTTTTCCTGCGCCCTCCTCGAATGGGAGGCCTATGATCCGATTCGCCAGCGGTGGATGCATCTGCCAAGGATGGCTTCTAATGAATGCTTCATGTGTTCAGATAAGGAATCTTTAGCTGCTGGCACTGAGCTGCTTGTGTTTGGGAGGGAGCTGAGATCCCATGTCACTTACAGATACAGTCTCTTGACAAACTCGTGGACCTCTGGAACAAGGATGAATGCTCCAAGATGCTTGTTTGGCTCAGCAAGCCTTGGTGAGATTGCAATATTAGCTGGTGGGTGTGATTCAGAGGGACACATCCTTGACTCTGCTGAGTTATATAATTCCGAGACTCAAACGTGGGAAACACTCCCAAGAATGAAAAAACCCAGGAAGATGTCCTCTGGGGTATTTATGGATGGAAAGTTTTATGTTATAGGGGGGATTGGGGGGAGTGACTCTAAGCTCCTCACATGTGGAGAGGAGTACAATTTACAGACTAGGACATGGACTGAGATTCCTAACATGTCCCCCGGACGTAGTAGTAGGGGTCCTGAGATGCCTGCAACAGCTGAGGCACCACCTCTGGTTGCTGTTGTAAATGATGAATTGTATGCTGCTGATTATGCTGACATGGAGGTTAAGAAGTATGACAAGGAGAGAAATGTGTGGTTTACCATTGGGAGACTGCCAGAACGAGCAGTGTCAATGAATGGCTGGGGTCTTGCATTCAGGGCATGTGGAGATAAGCTTATTGTCATTGGTGGACCTAGGACTCATGGTGAGGGTTTTATTGAACTCAATTCATGGGTGCCTAGTGAAGGGCCTCCACGGTGGGATCTACTTGCTAGAAAACGTTCTGGCAACTTTGTCTATAATTGTGCTGTGATGGGATGCTGA 1620 0.479 MLDGRSCVVPRLFSGTCQAENEWSYMKCLLELDIKNGKRPMGIDDVEEDEPHQPRKCTKKLDSCHRVEMARISFQRQSIEAKDSVVVPPLDQETIEPLSVCQGVVGEEGALTDRLLCEKEHEGDGDLMDFGDHQSDKQQQAQPGDLSDFGVRLFDEDQLQHDDNLLNLSEQQSEGRQQQHHHGGDSSDSSSLLPRMNRDSSITCLSRCSRSDYGSLASLNRSFRNIIRSGELYQWRRLNGIMEHWIYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAAGTELLVFGRELRSHVTYRYSLLTNSWTSGTRMNAPRCLFGSASLGEIAILAGGCDSEGHILDSAELYNSETQTWETLPRMKKPRKMSSGVFMDGKFYVIGGIGGSDSKLLTCGEEYNLQTRTWTEIPNMSPGRSSRGPEMPATAEAPPLVAVVNDELYAADYADMEVKKYDKERNVWFTIGRLPERAVSMNGWGLAFRACGDKLIVIGGPRTHGEGFIELNSWVPSEGPPRWDLLARKRSGNFVYNCAVMGC 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00965 539 MobiDBLite consensus disorder prediction 123 147 - -
Gma02g00965 539 Pfam Kelch motif 322 367 IPR006652 GO:0005515
Gma02g00965 539 Pfam Kelch motif 370 417 IPR006652 GO:0005515
Gma02g00965 539 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 539 - -
Gma02g00965 539 SUPERFAMILY Kelch motif 252 535 IPR015915 GO:0005515
Gma02g00965 539 SMART kelc_smart 382 442 IPR006652 GO:0005515
Gma02g00965 539 SMART kelc_smart 290 333 IPR006652 GO:0005515
Gma02g00965 539 SMART kelc_smart 334 381 IPR006652 GO:0005515
Gma02g00965 539 MobiDBLite consensus disorder prediction 171 194 - -
Gma02g00965 539 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 539 - -
Gma02g00965 539 Gene3D - 248 522 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00965 Gma-Chr2 10250074 10254052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00965 199 415 EF-hand Containing Proteins AT4G39560 25.806 7.45e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00965 - - gmx:100820308 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00965 02 10250074 10254052 Gma02g00965 02 10250074 10254052 ECH
Gma01g00413 01 5138691 5141702 Gma02g00965 02 10250074 10254052 GST
Gma02g00965 02 10250074 10254052 Gma17g00928 17 7929213 7930439 PCT
Gma02g00965 02 10250074 10254052 Gma05g00274 05 2471333 2472556 PCT