Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01986 ATGGCTGAGGAAGTTCCAAAGACAAGCACAACTCAAGAGGAGGTGGTGGTCTCTGACGTGGCACCTGCTGAGAAACCAGACACCACCAACGTTGTTGTTGTTCCCCTAGAGAAAGACGCACAACCACAACAAAATGAAGAAGAAACCTCGCCAGAGAAGAAGAAAGAGAACGTTACCGAAACTGAAACCGAGTCCGAGGTTTCAAAACCAAGTGGCGACGGCAACGTTCCTGAATCCGGTTCTTTCAAGGAAGAAAGCACCATTGTCTCCGACCTACCAGAGACCGAGAAAAAGGCTCTGCAAGAACTCAAACAACTTATTCAAGAAGCGCTCAACAAACACGAATTCTCCGCGGTGCCAACAAGTAACCCTCCCAAAGATGAAAAACCCGACAACAAGGAAGAACAGAACCCCGCGGAGGAAGAAGAGAAGCAACAAGTTTTTGATGCTGCTGCTGACGTGGCAGAAGCGACAGAAAAAGAAGCTGCAGAAGTTAAGGTAACCGAAACTGAGGTTGATGAAGAGAAAGTGGCGGTGTCTGCTTCTTCTGCTGATGAAGACGGAGCTAAAACGGTGGAAGCTATCGAAGAAAGCGTTGTGTCTGTGACTGTTTCCGAGGAAGCAAAGGTGGAAGCTGTTTCTGCTTCACCCGAAGAAGTTTCCATCTGGGGTGTTCCTCTTCTTGCTGACGAGAGGAGCGACGTGATTCTCTTAAAGTTTCTGCGTGCTCGGGACTTCAAGGTGAAGGAGGCATTCGCGATGATAAAGGGCACGATTCGGTGGAGGAAGGAGTTCAAGATGGAGGAGTTGTTATTGGAGGATTTAGGTGATGATTTGGAGAAAGCGGTGTACATGCATGGATTCGACAAGGAGGGTCACCCCGTGTGTTACAATATCTATGGGGAGTTTCAGAACAAGGAGTTGTACAAGAAGAGTTTCTCTGATGAGGAGAAGAGGTATAGATTTCTCAGGTGGAGGATTCAGTTCCTGGAGAAGAGTATCAGGAAGCTGGACTTTAACCCTGGTGGGATAAGCACCATTGTTCAGGTTAATGATCTCAAGAATTCTCCTGGCCCTGCCAAGTGGGAGCTTAGACAGGCTACCAAACAGGCCCTCCAGCTGCTTCAGGATAACTATCCTGAGTTTGTAGCCAAACAGGTGTTTATCAATGTGCCTTGGTGGTACTTGGCAGTGAACAGGATGATAAGCCCTTTTCTTACTCAGAGAACCAAAAGCAAGTTTGTCTTTGCTGGACCTTCTAAATCAGCTGAGACCCTTTTGAGATACATTGCTGCGGAGCAACTTCCGGTCAAGTATGGGGGACTAAGCAAAGATGGCGAGTTCGGAATTTCCGATGCTGTTACAGAAATTACAGTGAGGCCAGCAGCAAAACATACGGTAGAGTTTCCAGTTACTGAGAACTCTCTACTCTCTTGGGAGCTCAGAGTAATAGGGTGGGATGTAAGCTATGGTGCAGAGTTTGTGCCAACTTCAGAGGGAAGTTATACTGTGATCATCCAGAAGGCTAGAAAGGTTGCTTCATCAGAAGAACCGGTGCTTTGCAACAACTACAAAATTGGTGAACCTGGGAAAGTGGTTCTCACCATTGACAATCAAAGCTCTAAGAAGAAGAAGCTCTTGTACCGCTTAAAGGTCAAGCCTTCTTCTGACTGA 1674 0.4707 MAEEVPKTSTTQEEVVVSDVAPAEKPDTTNVVVVPLEKDAQPQQNEEETSPEKKKENVTETETESEVSKPSGDGNVPESGSFKEESTIVSDLPETEKKALQELKQLIQEALNKHEFSAVPTSNPPKDEKPDNKEEQNPAEEEEKQQVFDAAADVAEATEKEAAEVKVTETEVDEEKVAVSASSADEDGAKTVEAIEESVVSVTVSEEAKVEAVSASPEEVSIWGVPLLADERSDVILLKFLRARDFKVKEAFAMIKGTIRWRKEFKMEELLLEDLGDDLEKAVYMHGFDKEGHPVCYNIYGEFQNKELYKKSFSDEEKRYRFLRWRIQFLEKSIRKLDFNPGGISTIVQVNDLKNSPGPAKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSAETLLRYIAAEQLPVKYGGLSKDGEFGISDAVTEITVRPAAKHTVEFPVTENSLLSWELRVIGWDVSYGAEFVPTSEGSYTVIIQKARKVASSEEPVLCNNYKIGEPGKVVLTIDNQSSKKKKLLYRLKVKPSSD 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01986 557 SUPERFAMILY CRAL/TRIO N-terminal domain 89 273 IPR036273 -
Gma04g01986 557 MobiDBLite consensus disorder prediction 89 103 - -
Gma04g01986 557 Pfam CRAL/TRIO domain 281 441 IPR001251 -
Gma04g01986 557 SMART sec14_4 277 444 IPR001251 -
Gma04g01986 557 SMART CRAL_TRIO_N_2 233 258 IPR011074 -
Gma04g01986 557 SUPERFAMILY CRAL/TRIO domain 283 444 IPR036865 -
Gma04g01986 557 PANTHER PATELLIN-3 PROTEIN 17 556 - -
Gma04g01986 557 MobiDBLite consensus disorder prediction 1 16 - -
Gma04g01986 557 Pfam CRAL/TRIO, N-terminal domain 216 256 IPR011074 -
Gma04g01986 557 Gene3D GOLD domain 457 553 - -
Gma04g01986 557 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 452 554 IPR036598 -
Gma04g01986 557 MobiDBLite consensus disorder prediction 1 147 - -
Gma04g01986 557 PANTHER PATELLIN-1 17 556 IPR044834 GO:0008289
Gma04g01986 557 Gene3D - 197 456 IPR036865 -
Gma04g01986 557 MobiDBLite consensus disorder prediction 126 147 - -
Gma04g01986 557 CDD SEC14 283 442 IPR001251 -
Gma04g01986 557 MobiDBLite consensus disorder prediction 41 67 - -
Gma04g01986 557 ProSiteProfiles GOLD domain profile. 451 552 IPR009038 -
Gma04g01986 557 MobiDBLite consensus disorder prediction 68 88 - -
Gma04g01986 557 PRINTS Cellular retinaldehyde-binding protein signature 236 258 - -
Gma04g01986 557 PRINTS Cellular retinaldehyde-binding protein signature 399 418 - -
Gma04g01986 557 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 272 447 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01986 Gma-Chr4 50305939 50309774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01986 237 436 Acyl Lipid Metabolism Gene Families AT1G55840 28.241 1.31e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01986 - - gmx:100805585 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01986 04 50305939 50309774 Gma06g01427 06 13564534 13568407 GST
Gma05g01942 05 40818399 40821338 Gma04g01986 04 50305939 50309774 PCT
Gma08g00049 08 421707 425152 Gma04g01986 04 50305939 50309774 PCT
Gma04g01986 04 50305939 50309774 Gma05g01942 05 40818399 40821338 PCT
Gma04g01986 04 50305939 50309774 Gma08g00049 08 421707 425152 PCT