Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01745 ATGGCTGCTGCAACTGCCCCAAGATTCATCAAGTGTGTGACCGTTGGCGATGGAGCTGTAGGGAAGACCTGCATGCTCATTTGCTATACCAGCAACAAATTCCCCACGGACTATATCCCCACTGTGTTTGATAATTTCAGTGCAAATGTGGTTGTTGAAGGCATAACTGTCAATTTAGGCCTTTGGGATACAGCTGGGCAAGAGGATTACAACAGGCTGAGGCCCTTGAGCTACAGGGGGGCAGATGTCTTTGTCTTGGCTTTTTCTTTAGTTAGTCGCGCAAGCTATGAGAATGTGCTGAAGAAGTGGATCCCTGAACTCCAGCATTTTGCCCCTGGCATCCCATTGGTATTAGTTGGCACAAAATTGGATCTGCGCGAAGACAGGCACTATATGGCTGATCATCCTGGCTTGGTGCCCGTGACTACTGAGCAAGGTGAGGAACTCCGTAAACATATTGGAGCTACCTACTATATTGAGTGCAGCTCAAAAACTCAGCAGAATGTGAAGGCAGTTTTTGATGCTGCGATCAGAATGGTCATCAAGCCTCCACAAAAGCAAAACGAGAAAAGGAAGAAAAAACCACGTGGCTGTTTCCTAAATGTCCTCTGTGGAAGGAACATTGTTCGTCTTAAGTGA 639 0.4679 MAAATAPRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGITVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGIPLVLVGTKLDLREDRHYMADHPGLVPVTTEQGEELRKHIGATYYIECSSKTQQNVKAVFDAAIRMVIKPPQKQNEKRKKKPRGCFLNVLCGRNIVRLK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01745 212 ProSiteProfiles small GTPase Ras family profile. 5 203 IPR001806 GO:0003924|GO:0005525
Gma04g01745 212 PRINTS Transforming protein P21 ras signature 10 31 - -
Gma04g01745 212 PRINTS Transforming protein P21 ras signature 33 49 - -
Gma04g01745 212 PRINTS Transforming protein P21 ras signature 50 72 - -
Gma04g01745 212 PRINTS Transforming protein P21 ras signature 112 125 - -
Gma04g01745 212 PRINTS Transforming protein P21 ras signature 158 180 - -
Gma04g01745 212 TIGRFAM small_GTP: small GTP-binding protein domain 10 174 IPR005225 GO:0005525
Gma04g01745 212 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 180 IPR027417 -
Gma04g01745 212 SMART ras_sub_4 7 183 - -
Gma04g01745 212 ProSiteProfiles small GTPase Rho family profile. 3 180 - -
Gma04g01745 212 PANTHER RHO FAMILY GTPASE 1 205 IPR003578 GO:0005525|GO:0007264
Gma04g01745 212 CDD Rop_like 9 181 - -
Gma04g01745 212 SMART rab_sub_5 10 183 - -
Gma04g01745 212 Pfam Ras family 11 181 IPR001806 GO:0003924|GO:0005525
Gma04g01745 212 Gene3D - 3 200 IPR027417 -
Gma04g01745 212 PANTHER - 1 205 - -
Gma04g01745 212 ProSiteProfiles small GTPase Rab1 family profile. 5 212 - -
Gma04g01745 212 SMART rho_sub_3 12 183 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01745 Gma-Chr4 46903734 46907672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01745 6 196 EF-hand Containing Proteins AT5G27540 25.773 1.39e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01745 K04392 - gmx:100499774 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01745 04 46903734 46907672 Gma04g01745 04 46903734 46907672 ECH
Gma04g01745 04 46903734 46907672 Gma06g01650 06 16366212 16370638 GST
Gma17g00864 17 7323117 7326587 Gma04g01745 04 46903734 46907672 PCT
Gma05g00334 05 3116889 3120864 Gma04g01745 04 46903734 46907672 PCT
Gma04g01745 04 46903734 46907672 Gma17g00864 17 7323117 7326587 PCT
Gma04g01745 04 46903734 46907672 Gma05g00334 05 3116889 3120864 PCT