Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00570 ATGGCCGCCTCAGTACCAACCGTTGGAGCCGTTAACATTGCACAGTTGAAACTGAATGGCTCTAGCAGTAGGGTGACAAGCTCACCATTCTTTGGAACAAGTTTGAAGAAAGTCAATTCTGAGAGTTCAAGCCAGAGGGGTGTGTGTCGGAATTTCAAGGTTTCTGCACAGATTGAATATGATGAGGAGAAGCAAACTTCAAAGGATAGATGGGGTGGACTTGCCTATGACACTTCAGATGACCAGCAAGATATCACTAGAGGGAAGGGAATGGTGGACACTCTCTTCCAAGCTCCCATGGAAAGTGGCACTCACTATGCTGTCATGAGTTCCTATGATTATATCAGTGCCGGACTTCGCCAGTACAATTTAGACAACACCATGGATGGCTTCTATATTGCTCCTGCATTTATGGACAAGATTGTTGTTCACATCACCAAGAACTTTTTGAACTTGCCAAATATTAAGGTCCCTCTTATTTTGGGTATTTGGGGAGGCAAAGGTCAGGGGAAATCATTTCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATAGTGATGAGTGCTGGAGAATTGGAAAGCGGaAATGCTGGAGAACCTGCAAAGTTGATTAGGCAAAGGTATCGCGAGGCAGCAGACATTATCAGAAAAGGAAAGATGTGCTGTCTCTTCATCAATGATCTTGATGCAGGAGCTGGTAGGCTTGGTGGAACCACTCAATACACAGTCAACAACCAGATGGTGAATGCAACCCTTATGAACATTGCTGACAACCCAACCAATGTCCAACTTCCTGGCATGTACAACAAGGAGGAGAATCCCCGTGTTCCCATCATAGTCACTGGCAATGACTTCTCAACATTGTATGCTCCTCTCATTCGTGATGGACGTATGGAGAAGTTCTATTGGGCACCTACTCGGGATGACAGGATTGGTGTCTGCCAAGGCATTTTCAGAACAGATGGTGTTCTAAAGGAGGATATTATCAAGCTTGTTGACACCTTCCTTGGGCAATCTATTGACTTCTTTGGTGCCTTGAGGGCCAGAGTCTATGATGATGAAGTAAGGAAGTGGATTTCTGGTGTTGGGGTGGAGAATATTGGGAAAAAGCTGGTGAACTCAAAGGAGGGACCTCCAACATTTGAGCAACCAAAGATGACTCTTAGCAAGCTCCTTGAGTATGGAAACATGCTTGTCCAAGAGCAAGAGAATGTGAAGAGGGTTCAATTGGCTGACAAATATCTCAATGAGGCTGCACTTGGAGATGCAAATGATGATGCCATCAAGACTGGAAACTTCTATGGACAAGGAGCTCAGCAAGTTCATGTTCCTGTCCCTGAAGGTTGCACTGACCCTACTGCTGAAAACTATGATCCAACAGCCAGAAGTGATGATGGAAGCTGCACATACAAATTTTAG 1425 0.4498 MAASVPTVGAVNIAQLKLNGSSSRVTSSPFFGTSLKKVNSESSSQRGVCRNFKVSAQIEYDEEKQTSKDRWGGLAYDTSDDQQDITRGKGMVDTLFQAPMESGTHYAVMSSYDYISAGLRQYNLDNTMDGFYIAPAFMDKIVVHITKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIVMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCQGIFRTDGVLKEDIIKLVDTFLGQSIDFFGALRARVYDDEVRKWISGVGVENIGKKLVNSKEGPPTFEQPKMTLSKLLEYGNMLVQEQENVKRVQLADKYLNEAALGDANDDAIKTGNFYGQGAQQVHVPVPEGCTDPTAENYDPTARSDDGSCTYKF 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00570 474 Gene3D - 308 420 - -
Gma03g00570 474 Gene3D - 123 307 IPR027417 -
Gma03g00570 474 Pfam ATPase family associated with various cellular activities (AAA) 163 304 IPR003959 GO:0005524|GO:0016887
Gma03g00570 474 MobiDBLite consensus disorder prediction 455 474 - -
Gma03g00570 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 332 IPR027417 -
Gma03g00570 474 PANTHER - 1 473 IPR044960 -
Gma03g00570 474 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC-LIKE ISOFORM X1 1 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00570 Gma-Chr3 15900164 15903674 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00570 - - gmx:100795298 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00570 03 15900164 15903674 Gma18g00343 18 2888779 2893462 ECH
Gma03g00570 03 15900164 15903674 Gma11g02235 11 37674320 37678460 ECH
Gma03g00570 03 15900164 15903674 Gma02g02359 02 49650302 49654254 ECH
Gma03g00570 03 15900164 15903674 Gma14g00575 14 5524934 5529317 ECH
Gma03g00570 03 15900164 15903674 Gma03g00570 03 15900164 15903674 ECH