Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00343 ATGTTTTTCAATTTGAACCTGAATGGTTCTGGAGCTGGAGCTTCAGCTCCCAGTTCAGCCTTCTTTGGGACCAGCTTGAAGAAGGTTATTGCCTCAAGGGTCCCCAACAGCAAGGTTTCCGGTGGAAGCTTCAAGATTGTTGCTGTAGAAGAGAAGAAAGAGATTGAAGAGACCCAGCAGACCGACAAGGACAGATGGAAGGGTCTTGCCTATGATATCTCAGACGACCAACAAGACATCACAAGAGGAAAGGGTTTGGTTGACTCCCTTTTCCAAGCTCCACAGGATGCTGGAACTCACTATGCAGTCATGAGCTCCTACGAGTACCTCAGCACTGGACTTCGCCAGTACTTGGACAACAAAATGGATGGATTCTACATTGCTCCAGCTTTTATGGACAAGCTTGTTGTTCACATCTCCAAGAACTTCATGACCCTGCCCAACATCAAGGTTCCTCTCATTCTTGGTATCTGGGGAGGCAAGGGACAAGGAAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCAGGAGAGCCAGCAAAACTGATCAGGCAGAGATACCGTGAAGCTGCAGACATGATCAAGAAGGGAAAGATGTGCGCTCTCTTCATCAACGATCTTGATGCAGGAGCTGGTCGTCTTGGTGGAACCACACAATACACTGTGAACAACCAGATGGTGAATGCCACTCTCATGAACATTGCTGATAACCCCACCAATGTGCAGCTTCCAGGTATGTACAACAAGGAAGAGAACCCCCGTGTTCCCATCATTGTCACCGGTAACGATTTCTCAACACTCTATGCACCTCTCATCCGTGATGGGCGTATGGAGAAGTTCTACTGGGCACCAACAAGGGAAGACCGCATTGGTGTTTGCACCGGAATTTTCCGCACTGATGGTATTCCTGAACAGGACATTGTCAAGCTTGTTGACACCTTCCCTGGCCAATCCATTGATTTCTTTGGTGCACTGAGGGCCAGAGTATATGATGATGAAGTGAGGAAGTGGATTTCTGGTGTTGGTGTTGACAGTGTTGGGAAGAAGCTTGTGAACTCAAAAGATGGACCTCCAACCTTTGAGCAGCCCAAGATGACTCTGGAGAAGCTCTTGCTGTATGGTAACATGCTTGTCCAAGAACAAGAGAATGTCAAGAGAGTCCAATTGGCTGACAAGTACTTGAACGAGGCTGCTCTTGGAAATGCTAACGAGGATGCTATTCAGAGGGGAACTTTCTTCCAGTCTTGA 1299 0.475 MFFNLNLNGSGAGASAPSSAFFGTSLKKVIASRVPNSKVSGGSFKIVAVEEKKEIEETQQTDKDRWKGLAYDISDDQQDITRGKGLVDSLFQAPQDAGTHYAVMSSYEYLSTGLRQYLDNKMDGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDGIPEQDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKDGPPTFEQPKMTLEKLLLYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIQRGTFFQS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00343 432 Pfam ATPase family associated with various cellular activities (AAA) 157 298 IPR003959 GO:0005524|GO:0016887
Gma18g00343 432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 326 IPR027417 -
Gma18g00343 432 Gene3D - 117 301 IPR027417 -
Gma18g00343 432 Gene3D - 302 414 - -
Gma18g00343 432 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 5 430 - -
Gma18g00343 432 PANTHER - 5 430 IPR044960 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00343 Gma-Chr18 2888779 2893462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00343 - - gmx:100797222 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00343 18 2888779 2893462 Gma11g02235 11 37674320 37678460 ECH
Gma03g00570 03 15900164 15903674 Gma18g00343 18 2888779 2893462 ECH
Gma18g00343 18 2888779 2893462 Gma18g00343 18 2888779 2893462 ECH
Gma18g00343 18 2888779 2893462 Gma11g02235 11 37674320 37678460 GST