Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02359 ATGGCTGCCTCAGTCTCCACTGTTGGAGCTGTCAACGGAGCTCCACTGAGCTTGAACAGCTCTGGAGCTGGAGCTTCAGTTCCCAGTTCAGCCTTCTTTGGCACCAGCTTGAAGAAGGTTATTGCCTCAAGGGTCCCTAACGTCAAGATTTCTTCTGGAAGTTTCAAAATCGTTGCCGCGGAAAAAGAGATTGATGAGAAACAACAGACAGACAAGGACAGATGGAAAGGTCTTGCCTATGATGTTTCAGACGACCAGCAAGACATCACAAGAGGGAAGGGTTTGGTTGATTCCCTCTTCCAAGCTCCACAGGATACTGGAACTCACTATGCAATCATGAGCTCTTATGAGTACCTTAGCACTGGACTTAAACAGTACAACTTGGATAACAACATGGACGGTTTTTACATTGCTCCTGCTTTTATGGACAAGCTTGTTGTTCACATCAGCAAGAACTTCATGACCCTGCCCAACATCAAGGTTCCTCTCATTCTTGGTATCTGGGGAGGCAAAGGTCAAGGAAAATCCTTCCAATGCGAGCTTGTCTTTGCCAAGATGGGAATCAACCCTATCATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCAGGAGAGCCAGCAAAACTGATCAGACAGAGATACCGTGAAGCCGCAGACATGATCAAGAAGGGAAAGATGTGTGCTCTCTTCATCAACGATCTTGATGCAGGAGCTGGTCGTCTTGGTGGAACTACACAATACACTGTCAACAACCAGATGGTGAATGCCACCCTCATGAACATTGCTGATAACCCCACCAATGTGCAGCTTCCTGGTATGTACAACAAGGAAGAGAACCCCCGTGTGCCCATCATCGTCACCGGTAACGATTTCTCAACACTGTATGCTCCTCTCATCCGTGATGGGCGTATGGAGAAGTTCTACTGGGCACCTACAAGGGACGATCGTGTTGGCGTCTGCAATGGAATTTTCCGCACTGACAATGTTCCTAAGGATGACATTGTCAAGCTTGTTGACACCTTCCCCGGCCAATCTATTGATTTCTTTGGTGCACTCAGGGCTAGAGTATATGATGATGAGGTGAGGAAGTGGATTTCTGTTGTTGGTGTTGACTTCATTGGGAAGAAGCTTGTGAACTCCAAGGAAGGACCTCCAACCTTTGACCAACCGAAGATGACTTTGAGCAAGCTCTTGGAGTATGGTAACATGCTTGTCCAAGAACAAGAGAATGTGAAGAGAGTACAACTGGCAGACAAGTACTTGAAAGAGGCTGCTCTTGGTGATGCTAATCAAGATTCCATCAACAGAGGAACTTTCTATGGCAAAGCAGCTCAGCAAGTAAACATTCCCGTTCCTGAAGGTTGTACTGATCCAAATGCCTCAAACTTCGACCCAACTGCAAGAAGTGATGATGGAACCTGCTTATACACACCCTGA 1437 0.4676 MAASVSTVGAVNGAPLSLNSSGAGASVPSSAFFGTSLKKVIASRVPNVKISSGSFKIVAAEKEIDEKQQTDKDRWKGLAYDVSDDQQDITRGKGLVDSLFQAPQDTGTHYAIMSSYEYLSTGLKQYNLDNNMDGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCNGIFRTDNVPKDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISVVGVDFIGKKLVNSKEGPPTFDQPKMTLSKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANQDSINRGTFYGKAAQQVNIPVPEGCTDPNASNFDPTARSDDGTCLYTP 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02359 478 Gene3D - 127 311 IPR027417 -
Gma02g02359 478 PANTHER - 1 477 IPR044960 -
Gma02g02359 478 MobiDBLite consensus disorder prediction 455 478 - -
Gma02g02359 478 Gene3D - 312 424 - -
Gma02g02359 478 Pfam ATPase family associated with various cellular activities (AAA) 167 308 IPR003959 GO:0005524|GO:0016887
Gma02g02359 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 336 IPR027417 -
Gma02g02359 478 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02359 Gma-Chr2 49650302 49654254 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02359 - - gmx:100806240 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02359 02 49650302 49654254 Gma14g00575 14 5524934 5529317 ECH
Gma03g00570 03 15900164 15903674 Gma02g02359 02 49650302 49654254 ECH
Gma02g02359 02 49650302 49654254 Gma02g02359 02 49650302 49654254 ECH