Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02235 ATGAATGCACATTATGTTGCCACGTGTCGGCTGATCAATCTTCTATGTGTGGATTTGAAGTCTTGCCCTTCTCTCTTCAACTCCAAACACAAGACATCATCATCCATGGCTGCCTCCGTCTCCACTGTCGGAGCTGTCAACAGAGCTCTTTTGAACCTGAATGGGTCTGGACCTGGGGTTTCAGCTCCCAGTTCATCCTTCTTTGGGAGCAGCTTGAAGAAGGTTATTGGCTCAAGGGTCCCCAACACAAAGATTTCCTCTGGAAGCTTCAAGATTGTTGCTGTAGAAGAGAAGAAAGAGATTGAAGAGACCCAGCAGACCGACAAGGACAGATGGAAGGGTCTTGCCTATGATATCTCAGACGACCAACAGGACATCACAAGAGGAAAGGGTTTGGTTGACTCCCTTTTCCAAGCTCCACAGGATGCTGGAACTCACTATGCTGTCATGAGCTCCTACGAGTACCTTAGCACTGGACTTCGCCAGTACTTGGACAACAACATGGATGGATTTTACATTGCTCCAGCTTTTATGGACAAACTTGTTGTTCACATTACCAAGAACTTCATGACCCTGCCCAACATCAAGGCATGCCACTACAAACATATTAATTCTTTGCATAAACTGAACAACACATTCATTTTTTTTTCTTCAATATTTTACCAGGTTCCTCTCATTCTTGGTATCTGGGGAGGCAAGGGACAAGGAAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCAGGAGAGCCAGCAAAACTGATCAGGCAGAGATACCGTGAAGCCGCAGACTTGATCAAGAAGGGAAAGATGTGTGCTCTCTTCATCAACGATCTTGATGCAGGAGCTGGTCGTCTTGGTGGAACCACCCAATACACTGTCAACAACCAGATGGTGAATGCCACCCTCATGAACATTGCTGATAACCCCACCAATGTGCAGCTTCCTGGTATGTATAACAAGGAAGAGAATCCCCGTGTGCCCATCATCGTCACCGGTAACGATTTCTCCACACTCTATGCGCCTCTCATCCGTGATGGGCGTATGGAGAAGTTCTACTGGGCACCAACAAGGGATGACCGCATTGGTGTCTGCACTGGAATTTTTCGCACCGATTCAATTCCTGAACAGGACGTTGTCAAGATTGTTGACACCTTCCCTGGCCAATCCATTGATTTCTTTGGTGCACTGAGGGCCAGAGTATATGATGACGAAGTGAGGAAGTGGATTTCTGGTGTTGGTGTTGACGGCATTGGGAAGAAGCTTGTGAACTCAAAAGATGGACCTCCAACCTTTGAGCAGCCCAAGATGACTCTGGAGAAGCTCTTGACGTATGGGGAACTTTCTTCCAATCTTGAATTGGAGGCAAAGCAAACTTGGCAAGTAAATATTTCTGTTCCTGAAGGTTGTGCTGATCCAAGTGCTAGAAGTTGTGATGGGACTTGCGTGTAA 1503 0.4657 MNAHYVATCRLINLLCVDLKSCPSLFNSKHKTSSSMAASVSTVGAVNRALLNLNGSGPGVSAPSSSFFGSSLKKVIGSRVPNTKISSGSFKIVAVEEKKEIEETQQTDKDRWKGLAYDISDDQQDITRGKGLVDSLFQAPQDAGTHYAVMSSYEYLSTGLRQYLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKACHYKHINSLHKLNNTFIFFSSIFYQVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCTGIFRTDSIPEQDVVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDGIGKKLVNSKDGPPTFEQPKMTLEKLLTYGELSSNLELEAKQTWQVNISVPEGCADPSARSCDGTCV 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02235 500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 395 IPR027417 -
Gma11g02235 500 Pfam ATPase family associated with various cellular activities (AAA) 229 370 IPR003959 GO:0005524|GO:0016887
Gma11g02235 500 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 36 197 - -
Gma11g02235 500 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 220 465 - -
Gma11g02235 500 Gene3D - 372 475 - -
Gma11g02235 500 Gene3D - 163 371 IPR027417 -
Gma11g02235 500 PANTHER - 36 197 IPR044960 -
Gma11g02235 500 PANTHER - 220 465 IPR044960 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02235 Gma-Chr11 37674320 37678460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02235 - - gmx:100818034 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00343 18 2888779 2893462 Gma11g02235 11 37674320 37678460 ECH
Gma03g00570 03 15900164 15903674 Gma11g02235 11 37674320 37678460 ECH
Gma11g02235 11 37674320 37678460 Gma11g02235 11 37674320 37678460 ECH
Gma18g00343 18 2888779 2893462 Gma11g02235 11 37674320 37678460 GST