Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01749 ATGTCAGACGCGTTCTGCAGCGACTGCAAGAGGCAGACGGAGGTGGTGTTTGACCACTCTGCCGGCGACACGGTGTGCTCGGAGTGCGGCCTCGTACTGGAGTCCCACTCTATCGACGAGACCTCTGAGTGGCGTACCTTCGCCAACGAGTCCGGTGACAACGATCCCAATCGTGTCGGCGGGCCCTCCAACCCCCTCCTCACCGACGGCGGCCTCTCCACCGTCATCGCCAAGCCCAACGGCGGCGGAGGTGGCGGCGAGTTCCTCTCCTCCTCCCTCGGTCGCTGGCAGAACCGCGGCTCCAACCCTGATCGCGCCCTCATCATCGCCTTCAAGACCATCGCCACCATGTCCGACAGGTTGGGACTCGTTGCGACCATCAAGGATCGGGCAAATGAGATATATAAGAGGGTTGAAGATCAAAAGTCTAGTAGAGGAAGAAATCAAGATGCTTTATTGGCTGCTTGTCTCTACATCGCTTGCCGACAAGAAGACAAACCTCGTACTGTAAAGGAAATTTGCTCTGTTGCCAATGGGGCCACAAAGAAGGAAATTGGCCGAGCTAAAGAATACATAGTAAAACAACTGGGTTTGGAGAACGGTAATGCTGTGGAGATGGGTACAATACATGCAGGGGACTTCATGAGGCGATTCTGTTCTAATCTTTGTATGAATAATCAAGCTGTTAAAGCTGCTCAGGAAGCTGTGCATAAATCAGAAGAATTTGATATAAGGAGGAGTCCCATTTCAATTGCTGCAGCAGTTATATACATCATAACTCAGCTTTCTGATGATAAGAAACCTCTCAAAGATATATCACTTGCCACAGGCGTTGCAGAAGGAACGATTAGGAACTCCTACAAGGATCTTTATCCCCATGTTTCCAAAATAATACCAAATTGGTATGCTAAGGAGGAGGATTTAAAGAATCTTTGCAGCCCTTGA 945 0.5016 MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVGGPSNPLLTDGGLSTVIAKPNGGGGGGEFLSSSLGRWQNRGSNPDRALIIAFKTIATMSDRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLENGNAVEMGTIHAGDFMRRFCSNLCMNNQAVKAAQEAVHKSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01749 314 Gene3D - 210 313 - -
Gma02g01749 314 ProSitePatterns Transcription factor TFIIB repeat signature. 146 161 IPR023486 -
Gma02g01749 314 SMART cyclin_7 112 194 IPR013763 -
Gma02g01749 314 SMART cyclin_7 213 292 IPR013763 -
Gma02g01749 314 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 3 314 IPR000812 GO:0006352|GO:0070897
Gma02g01749 314 SUPERFAMILY Cyclin-like 107 198 IPR036915 -
Gma02g01749 314 CDD CYCLIN 209 291 IPR013763 -
Gma02g01749 314 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 3 314 - -
Gma02g01749 314 Pfam Transcription factor TFIIB repeat 206 292 IPR013150 GO:0017025
Gma02g01749 314 Pfam Transcription factor TFIIB repeat 105 187 IPR013150 GO:0017025
Gma02g01749 314 SUPERFAMILY Zinc beta-ribbon 4 50 - -
Gma02g01749 314 PRINTS Transcription initiation factor IIB signature 19 39 IPR000812 GO:0006352|GO:0070897
Gma02g01749 314 PRINTS Transcription initiation factor IIB signature 41 54 IPR000812 GO:0006352|GO:0070897
Gma02g01749 314 PRINTS Transcription initiation factor IIB signature 55 76 IPR000812 GO:0006352|GO:0070897
Gma02g01749 314 PRINTS Transcription initiation factor IIB signature 154 173 IPR000812 GO:0006352|GO:0070897
Gma02g01749 314 PRINTS Transcription initiation factor IIB signature 181 196 IPR000812 GO:0006352|GO:0070897
Gma02g01749 314 PRINTS Transcription initiation factor IIB signature 214 232 IPR000812 GO:0006352|GO:0070897
Gma02g01749 314 PRINTS Transcription initiation factor IIB signature 246 262 IPR000812 GO:0006352|GO:0070897
Gma02g01749 314 PRINTS Transcription initiation factor IIB signature 278 292 IPR000812 GO:0006352|GO:0070897
Gma02g01749 314 Gene3D - 5 195 - -
Gma02g01749 314 CDD CYCLIN 107 187 IPR013763 -
Gma02g01749 314 Pfam TFIIB zinc-binding 6 47 IPR013137 -
Gma02g01749 314 SUPERFAMILY Cyclin-like 209 310 IPR036915 -
Gma02g01749 314 ProSiteProfiles Zinc finger TFIIB-type profile. 2 34 IPR013137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01749 Gma-Chr2 38683236 38687534 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01749 K03124 - gmx:100790355 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01749 02 38683236 38687534 Gma02g01749 02 38683236 38687534 ECH
Gma10g01028 10 27241244 27245605 Gma02g01749 02 38683236 38687534 GST
Gma19g01298 19 42191638 42195291 Gma02g01749 02 38683236 38687534 PCT
Gma03g01250 03 38434593 38437582 Gma02g01749 02 38683236 38687534 PCT
Gma02g01749 02 38683236 38687534 Gma19g01298 19 42191638 42195291 PCT
Gma02g01749 02 38683236 38687534 Gma03g01250 03 38434593 38437582 PCT