Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01349 ATGGAATCAACTCATGTAATATCCATTACAAATGGAGAAGAGAATGTTGCTCCAACGAAGAATGCTAAAACATTCCAATTTTCACTTTCACTTCCACCCGTTTTTTCCCGTCTTAGAGAAAACAAATTAATCCAGTTCTCTCTTTTCCCCATCACTTCCTATCTGAGGCAAAAGAAAGACACTAAAAAAATTATCCACAGCATCAAAGTTGGAATCTCCCTTGTATTGATTTCACTCCTGTACTTCGTGGATCCTCTCTATGAGCAAGTTGGAGATAATGCTATATGGGCTATCATGACTGTTGTTGTCACTTTTGAATTTTCTGCGGGAGCTACGCTAGGAAAAGGTTTAAATCGCGGAATGGGAACCATATTAGGAGGTGGACTGGGTTGCATAGCCGCAGTTTTGGCTCAAAACGTTGGCGGAGGAATTGGCAACTCGATTATAATTGGTACTTCTGTATTTATCTTTGGAACAATTGCGACATATTGTCGCCTATTCCCTAGTGTGAAGAAGAGATACGATTACGGAGTGATGATCTTTATCCTCACTTTTAATTTGGTTGTGGTGTCTGGTGTGCGCATTCAAGATCAGAAAGTTTGGAAAATAGCAAGTGAACGTCTTTTAACAATTGTCATGGGTTTCGTTGTGTGCATTTGTGTGAGCTTCTTGGTCTTCCCCTTGTGGGCCAGCGATGAACTTCATGATTCCACTGTCTCTAGATTCCAACACCTTGCCAATGCATTACAAGGCTGCTTGGAGGAATATGTCAAATTTGCTACTGAAAAAGAAAATAAGAAGGCTGGTGCTAGCTTCACTGTTTGCAAGTCGCTGTTGGACTCCAAATCAAAGGATGAGATGCTGGCAAATTTCGCAAAATGGGAACCATGGCATGGAAAATTTGGATTTTTCTATCCATGGGAGAAGTACCTAAAGATTGGAGAGGTTCTTCGAGAACTTGCTGCAATTATTCTTGCTCTGGGAGGTTGCCTCCAAGCCTCAACTACGGTAGTTAAATAA 1020 0.4108 MESTHVISITNGEENVAPTKNAKTFQFSLSLPPVFSRLRENKLIQFSLFPITSYLRQKKDTKKIIHSIKVGISLVLISLLYFVDPLYEQVGDNAIWAIMTVVVTFEFSAGATLGKGLNRGMGTILGGGLGCIAAVLAQNVGGGIGNSIIIGTSVFIFGTIATYCRLFPSVKKRYDYGVMIFILTFNLVVVSGVRIQDQKVWKIASERLLTIVMGFVVCICVSFLVFPLWASDELHDSTVSRFQHLANALQGCLEEYVKFATEKENKKAGASFTVCKSLLDSKSKDEMLANFAKWEPWHGKFGFFYPWEKYLKIGEVLRELAAIILALGGCLQASTTVVK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01349 339 Pfam Aluminium activated malate transporter 58 335 IPR020966 GO:0015743
Gma02g01349 339 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 4 337 - -
Gma02g01349 339 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 4 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01349 Gma-Chr2 15646727 15650774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01349 58 332 Miscellaneous Gene Families AT5G46600 46.263 6.80e-86 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01349 - - gmx:100527892 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01349 02 15646727 15650774 Gma02g01349 02 15646727 15650774 ECH
Gma10g00248 10 2267347 2270460 Gma02g01349 02 15646727 15650774 GST
Gma19g01468 19 43917019 43919748 Gma02g01349 02 15646727 15650774 PCT
Gma03g01405 03 40189863 40192603 Gma02g01349 02 15646727 15650774 PCT
Gma19g01901 19 48200247 48202891 Gma02g01349 02 15646727 15650774 PCT
Gma03g01859 03 44540667 44542915 Gma02g01349 02 15646727 15650774 PCT
Gma02g01349 02 15646727 15650774 Gma19g01901 19 48200247 48202891 PCT
Gma02g01349 02 15646727 15650774 Gma03g01859 03 44540667 44542915 PCT