Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01468 ATGGAATCAACTCACGTACTAGCCATTACAAATGAAGAAGAGAATATTGCTCGTTCAAAAGAGAATAAAACATTCCAATTTCATCTTCCCCCCATCATTTCCCATCTTGGGAAAAATGAGGTCCACTGTGTCTCCATTACTTCCAATCCTAGACACAAGCAGATGCAAAGTGGTGGCCATGATATGAGGAAGATAATCCACTGCATCAAAGTGGGAATCTCCTTGGTTTTGGTTTCACTCCTGTACCTCTTGAATCCTCTCTTTAAGCAAGTTGGAGAAAATGCAATGTGGGCTATCATGACTGTTGTAGTCATGTTTGAATTCTCTGCAGGAGCCACAATTGGAAAGGGCTTCAATCGTGGACTAGGAACTATTATAGGAGGTGGACTAGGTTGCTTAGCAGCAGTTTTTGCCCAAAGCATTGGGATTGGCAGGCTTGGCAACTCAATTATTATTGGTGCTTCAGTATTTATATTTGGATCAGTTGCTACATATCTTCGACTGGTTCCAAGCATAAAGAAAAGATACGATTATGGGGTGATGATATTCATGCTCACATTCAATCTAGTTGTGGTTTCTGGCGTACGTGGGGATGTGAAAGTGTGGGACTTAGCCAGGGAGCGTCTCTTGAATATACTAATGGGCTTCATTGTGTGCGTTTGTGTGACTTTGTTTGTCTTCCCTTTGTGGGCTAGCGATGAACTTCATGATTCCACGGTCTCAAGATTCCTGGACCTTGCCAACACAATTCAAGTTTGTTTTGGGGAATGTACCAAAATCGTTAGTGGAAAGGAAAACCAACCTCGTGCTAGCTTCAACGTTTGCAAGTCAGTGTTGAACTCCAAGTCAAAGGACGAATCATTGGCAAATTTTGCAAAATGGGAACCCTGGCATGGAAAATTCGGATTTTCCTACCCTTGGGGAAGGTACTTAAAGATTGGTGAAGTTCTTCGAGAACTGGCTGCATTTATTCTTGCAGCGGGACGTTGCCTTGAAGCATCAAAAGAGCCCATGGCCTCTTTGAGACGGTCAAAATGGGTCCATTTAGAAACATGCGAAGCAGTTGAGTCAAAGGTTGTGTTTATTCTACGAGAACTTGGAGAAAGCATGAAGCAAATGAGGAAATGTGATGCAAAGGGCAACATTTCGGGCCAGTTGAAAAATGCAAGAGAAGATTTAAGCTTGATAATTTCCACATCTAAAATGGTGGAACTTGAGGATTGCCAAGTGCTAGCAATTGCTAGCTTCGTGTTCTTGCTCATGGAAGTGATAGGGAAGGTAGAGGAATTGGTGAAAGAGGTGGAGGAGCTCGAAGACATTGCTGGTTTTCGCACCACCACAACTTCATTGTCTTCGTAG 1359 0.429 MESTHVLAITNEEENIARSKENKTFQFHLPPIISHLGKNEVHCVSITSNPRHKQMQSGGHDMRKIIHCIKVGISLVLVSLLYLLNPLFKQVGENAMWAIMTVVVMFEFSAGATIGKGFNRGLGTIIGGGLGCLAAVFAQSIGIGRLGNSIIIGASVFIFGSVATYLRLVPSIKKRYDYGVMIFMLTFNLVVVSGVRGDVKVWDLARERLLNILMGFIVCVCVTLFVFPLWASDELHDSTVSRFLDLANTIQVCFGECTKIVSGKENQPRASFNVCKSVLNSKSKDESLANFAKWEPWHGKFGFSYPWGRYLKIGEVLRELAAFILAAGRCLEASKEPMASLRRSKWVHLETCEAVESKVVFILRELGESMKQMRKCDAKGNISGQLKNAREDLSLIISTSKMVELEDCQVLAIASFVFLLMEVIGKVEELVKEVEELEDIAGFRTTTTSLSS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01468 452 Coils Coil 420 440 - -
Gma19g01468 452 Pfam Aluminium activated malate transporter 58 437 IPR020966 GO:0015743
Gma19g01468 452 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 4 445 - -
Gma19g01468 452 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 4 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01468 Gma-Chr19 43917019 43919748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01468 58 399 Miscellaneous Gene Families AT5G46600 41.761 2.89e-85 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01468 - - gmx:100779890 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01468 19 43917019 43919748 Gma19g01468 19 43917019 43919748 ECH
Gma19g01468 19 43917019 43919748 Gma03g01405 03 40189863 40192603 GST
Gma19g01468 19 43917019 43919748 Gma10g00248 10 2267347 2270460 PCT
Gma19g01468 19 43917019 43919748 Gma02g01349 02 15646727 15650774 PCT