Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01859 ATGGATATAGAGTCAACAACCCAAGCAAACAAGGGTGGATTTTTATCTCATTTGGGGAACTGCCTCCAGGATTTGCCTTGGAACTTCAAGTCCAAGGTTATCAACATCACAAGGAGCATAACAAAGATTGGAAAAGATGACCCCAGACGAGTAATTCACTCATTAAAAGTGGCAGTTGCTCTCACATCGGTGTCATTGGTTTACTACTCGAGGCCTCTTTATGATGGCTTCGGAGTTGCCGGAATGTGGGCTGTTCTGACAGTGGTGGTAGTGTTTGAATTCAGTGTAGGTGCAACCCTCAGCAAAGGTTTAAATAGAGGATTTGCTACATTATTAGCTGGTGCTTTAGGGGTTGGAGGGCAACACTTAGCTACAGCTTTTGGAGGAAGAGCAGAACCTATTGTCCTTGGGATCCTTGTCTTCATTTTAGCAGCAGGAGCTACTTTTTTCAGATTTTTTCCAAAGATCAAGCAAAGATATGATTATGGGATTGTGGTATTTATATTGACATTTTGTTTGGTCGCTGTCTCGGGTTATAGAGTGGAAGAACTCTTCGAGCTTGCCCATCAGAGACTTTCAACAATTTTATTAGGAGCAGCAGCTTGCATGGTCATCTCCATTTTCATTTGTCCAGTATGGGCAGGTGAAGACTTTCACAAGTTGGTGGCTTCCAATATAGAAAAGTTAGCAAATTACCTACAAGGATTCGAAACCGAATATTTTCATTGCTCAGAGGATACAAAAAAGTGTGAGAAGTCAGTTCTTGAAGGATATAAAAGTGTTCTTAATTCTAAAGCAAGTGAGGAGTCCTTGGCAAATTTGGCAAGGTGGGAACCAGGACATGGCCGTTTTCGTCTTCGCCATCCTTGGGAGCAGTACTTGAAGATTGGAGCACTTACTCGGGAATGTGCTTACAAGATTGAAACCATTAACAACTACCTCAACCCGGAAATCCAAGTATCTTTGGAATTCAAGTGTAAAGTTCAGGAACCATGCACAAAGATGACCTCAGAGTCCAACAAGGCATTAAAGGCAATATCTTCATCAATCAAAAAAATGACACACCCATCAACTGCCAAAGTCCACATAGAAAATTCAAAAACTGCAGTTGAAGACCTCAAAGTTGCCCTTGAAATCGTTTCTTTGGAAGATACTGATCTCCTATCCATAATCCCAGTTGCCACAGTTGCATCAATACTCGAAGAAATCACCAAATCAGTGGAGAAAATATATGAGTCTGTTTCTGAGCTTTCTCACTTAGCCCATTTCAAGAGTGTTGTTGAACCCAATGTCTCACCAGAGAAGCCACCCCTTCTTCATCGAGGTATCATAAAACCTGTTGTGGATATTGATAACACCGTCGACCATGTTGAAATTACAATCCCAGAGATAACTACAGACTCTCCAGAGAAAGAAAAGGCACCAACAACAAAACCCTCGGAACATTTAATTTGTAAATAG 1461 0.4127 MDIESTTQANKGGFLSHLGNCLQDLPWNFKSKVINITRSITKIGKDDPRRVIHSLKVAVALTSVSLVYYSRPLYDGFGVAGMWAVLTVVVVFEFSVGATLSKGLNRGFATLLAGALGVGGQHLATAFGGRAEPIVLGILVFILAAGATFFRFFPKIKQRYDYGIVVFILTFCLVAVSGYRVEELFELAHQRLSTILLGAAACMVISIFICPVWAGEDFHKLVASNIEKLANYLQGFETEYFHCSEDTKKCEKSVLEGYKSVLNSKASEESLANLARWEPGHGRFRLRHPWEQYLKIGALTRECAYKIETINNYLNPEIQVSLEFKCKVQEPCTKMTSESNKALKAISSSIKKMTHPSTAKVHIENSKTAVEDLKVALEIVSLEDTDLLSIIPVATVASILEEITKSVEKIYESVSELSHLAHFKSVVEPNVSPEKPPLLHRGIIKPVVDIDNTVDHVEITIPEITTDSPEKEKAPTTKPSEHLICK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01859 486 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 8 1 438 - -
Gma03g01859 486 MobiDBLite consensus disorder prediction 465 486 - -
Gma03g01859 486 Pfam Aluminium activated malate transporter 42 418 IPR020966 GO:0015743
Gma03g01859 486 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01859 Gma-Chr3 44540667 44542915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01859 1 461 Miscellaneous Gene Families AT3G11680 57.660 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01859 - - gmx:100170704 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01859 03 44540667 44542915 Gma03g01859 03 44540667 44542915 ECH
Gma19g01901 19 48200247 48202891 Gma03g01859 03 44540667 44542915 GST
Gma03g01859 03 44540667 44542915 Gma10g00248 10 2267347 2270460 PCT
Gma03g01859 03 44540667 44542915 Gma02g01349 02 15646727 15650774 PCT
Gma10g00248 10 2267347 2270460 Gma03g01859 03 44540667 44542915 PCT
Gma02g01349 02 15646727 15650774 Gma03g01859 03 44540667 44542915 PCT