Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01405 ATGGAATCCACACACGTAATAGCCATTACAAATGGAGAAGAGAATATGATTCGTTCATCAAAAGAGAATAAAACATTCCAATTTCAACTTCCACCCATTATTTCCCATCTTGGGAAAAATGAAGTCCACTGTGTCTCCATTACTTCTTCCAATCCCAGACACAAGCAGGTGCAAAGTGGTGGCCATGACACGAGGAAGATAATCCACTGCATCAAAGTGGGAATCTCCTTGGTTTTGGTTTCACTCCTATACCTCTTGAACCCTCTCTTTAAGCAAGTTGGAGAAAATGCAATGTGGGCTATCATGACAGTTGTAGTCATGTTTGAATTCTCTGCAGGAGCCACACTAGGAAAGGGCTTCAATCGTGGACTAGGAACTATTATAGGAGGAGGACTAGGTTGCTTGGCAGCAGTTTTTGCCCAAAGCATTGGAATTGGCAGGGTTGGCAACTCAATTATAATCGGTGCTTCAGTATTTATATTTGGATCAGTAGCTACATATCTTCGACTGGTTCCAAGCATAAAGAAAAGATACGATTATGGGGTAATGATATTCATGCTGACTTTCAATCTAGTTGTGGTTTCTGGCGTACGTGGGGATGTGAAAGTGTGGGAATTAGCCAGGGAGCGTCTCTTGAATATACTAATGGGCTTCATTGTGTGCGTTTGTGTGACTTTGTTCGTCTTCCCTTTGTGGGCCAGCGATGAACTTCACGATTCCACAGTCTCAACATTCCTGGACCTTGCCAATACAATTCAAGGTTGTTTTGGGGAATGTACCAAAATCGTTAGTGGAAAGGAAAACCAACCCCGTGCTAGCTTCAACGTTTGCAAGTCAGTGTTGAACTCCAAGTCAAAGGATGAATCATTGGCAAATTTCGCAAAATGGGAACCCTGGCATGGAAAATTCGGATTTTCCTACCCTTGGGGAAGGTACTTAAAGATTGGTGAAGTTCTTCGAGAACTGGCTGCATTTATTCTTGCAGCAGGACACTGCCTTGAAGCATCAAAAGAGCCCATGGCATCTTTGAGGCAGTCACAATGGGTCCATTTAGAAACATGCGAAGCAGTTGAGACGAAGGTTGTGTATATTCTACGAGAACTTGGTGAAAGCATGAAGCAAATGAGGAAATGTGATGCAAAGGACAACATTTGGGACCAGTTGAAAAATGCCAGAGAAGATTTAAGCTTGATAATTTCCACATCCAAAATGGTGGAGCTTGAGGATTGCCAAGTGCTAGCAATTGCTAGCTTCGTGTTCTTGCTCATGGAAGTGGTAGGGAAGGTTGAGGAATTGGTCAAAGAGGTGGAGGAGCTAGGAGACATTGCTGGTTTTCGCACCACCACAACTTCATTGTCTTCGTAG 1365 0.433 MESTHVIAITNGEENMIRSSKENKTFQFQLPPIISHLGKNEVHCVSITSSNPRHKQVQSGGHDTRKIIHCIKVGISLVLVSLLYLLNPLFKQVGENAMWAIMTVVVMFEFSAGATLGKGFNRGLGTIIGGGLGCLAAVFAQSIGIGRVGNSIIIGASVFIFGSVATYLRLVPSIKKRYDYGVMIFMLTFNLVVVSGVRGDVKVWELARERLLNILMGFIVCVCVTLFVFPLWASDELHDSTVSTFLDLANTIQGCFGECTKIVSGKENQPRASFNVCKSVLNSKSKDESLANFAKWEPWHGKFGFSYPWGRYLKIGEVLRELAAFILAAGHCLEASKEPMASLRQSQWVHLETCEAVETKVVYILRELGESMKQMRKCDAKDNIWDQLKNAREDLSLIISTSKMVELEDCQVLAIASFVFLLMEVVGKVEELVKEVEELGDIAGFRTTTTSLSS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01405 454 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 4 447 - -
Gma03g01405 454 Pfam Aluminium activated malate transporter 60 440 IPR020966 GO:0015743
Gma03g01405 454 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 4 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01405 Gma-Chr3 40189863 40192603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01405 60 401 Miscellaneous Gene Families AT5G46600 42.045 4.61e-86 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01405 - - gmx:100802201 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01405 03 40189863 40192603 Gma03g01405 03 40189863 40192603 ECH
Gma19g01468 19 43917019 43919748 Gma03g01405 03 40189863 40192603 GST
Gma03g01405 03 40189863 40192603 Gma10g00248 10 2267347 2270460 PCT
Gma03g01405 03 40189863 40192603 Gma02g01349 02 15646727 15650774 PCT