Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2804 ATGCCGACGCCGGTCAACGCAGCGAGGCAATGCTTGACGGAGGAGGCGGGGCGTGCTCTTGATGATGCAGTGGCGGTTGCTCGCCGCCGCAACCATGCACAGACCACCTCGCTTCACGCTATCTCTGCTTTGCTCGCTTTGCCTTCCTCCGCGCTCCGGGAAGCTTGCACACGGGCACGGAGCTGCTCCCATTCGTCGCGTCTCCAGTTCCGAGCTCTGGAGCTCTCAGTTGGTGTCTCGCTTGACCGATTGCCCACATCCAAGGAACTTGAGGAGGACCCTCCTGTGTCCAATTCGCTCATGGCCGCCATCAAACGCTCCCAAGCCAACCAAAGGAGGCACCCAGAGAGCTTCCATTTGTTTCAGATGCATAGCCAGCAGCAACAAACCGCGTCGTTCTTGAAGGTGGAGCTCAAGCACTTCATCTTATCGATTCTCGATGACCCGATTGTGAGCAGGGTTTTGGGTGAAGCGGGTTTTCGGAGCTGTGACATCAAGCTTTCATTGCTTCAACCGCCTATCACTCAAGCTTCTCGATTCTCCCGGAGCCGGTACCCACCCATTTTCTTGTGCAATTTGACTGACTCGGAAACGGGTCGTCCCGGTTTCAACTTCCCTTTCATGGGCAATTCTGGACACGATGACGTGGATGAAAATTGTAGAAGAATTGGGGAGGTTCTTGTGAGGAAGACGAAGAAAAACCCCCTATTGATGGGTGTTTACGCGAAAATTGCTCTTCGGAGTTTCACAGAGTCAATACAGAAAGGTCGAGAGGGTGTGTTGCCAGCTGGAATAGCTGGGTTGAATATAATCTGCATTGAGAAGGAGATTGCTGAGCTTCTTGGTGATGGTGGGAGTGAGGAGAAAATAGGTTTGAAATTTAAGGACTTGAGTTGTGCAGTAGAGCAATGTTCTGGTTCTGGCATCGCAGTAAACTTTGGAGAGCTTGAGGCGTTCGTTGGAGATGATTTGCCTGGTGCTGCTGCCAGCTTTGTTGTGTCACAGTTGACAAGCTTATTAGAGATTCATGGTGGGAAAGTTTGGCTGATGGGTGTGGCAAGAACCTCAGATACCTATTCGAAGTTCTTAGCTCTGTTCCCGACCGTAGAAAAGGATTGGGATCTGCATTTACTGACCATGACATCTGCCACCCCTTCAATGGAAACACTCTTCTCTAAATCCAGCTTGATGGGGTCCTTTGTTCCATTTGGTGGGTTCTTTTCTTCACCATCTGAATTGAAAAATCCACTAAGCTGTACAAATCAATGTTTTACACGTTGTCACACATGCAATCAAAAATATGAACAAGAAGTTGCGGATATTCTAAAAGTACGTCCAACTACTTTGGCATCTGATTACTCAACAAGCTTGCCTTTGTCGCAAAAGGCTAATTTGGAGACAGATAAAGGATTGGACGTGGCAAAGACTGATGAAGAGAGTGCAAGTTTGAATGCTAAGATCTTGGGATTGCAAAAGAAATGGAGTGACTTTTGTCAAAGTCTTCATCACACCCAGTTGTTACCTGAATTTGATGCATCCCAAACAAGGTCTCAAGTTCCAATCTTAGGAGGCTTTCGATTTGATTCAGGCTTAAAGGAAAGTAGCAGTAAATATCCTTCTCTTGATCAAATCCAATGTTGGTTGGCAGGATGA 1653 0.4785 MPTPVNAARQCLTEEAGRALDDAVAVARRRNHAQTTSLHAISALLALPSSALREACTRARSCSHSSRLQFRALELSVGVSLDRLPTSKELEEDPPVSNSLMAAIKRSQANQRRHPESFHLFQMHSQQQQTASFLKVELKHFILSILDDPIVSRVLGEAGFRSCDIKLSLLQPPITQASRFSRSRYPPIFLCNLTDSETGRPGFNFPFMGNSGHDDVDENCRRIGEVLVRKTKKNPLLMGVYAKIALRSFTESIQKGREGVLPAGIAGLNIICIEKEIAELLGDGGSEEKIGLKFKDLSCAVEQCSGSGIAVNFGELEAFVGDDLPGAAASFVVSQLTSLLEIHGGKVWLMGVARTSDTYSKFLALFPTVEKDWDLHLLTMTSATPSMETLFSKSSLMGSFVPFGGFFSSPSELKNPLSCTNQCFTRCHTCNQKYEQEVADILKVRPTTLASDYSTSLPLSQKANLETDKGLDVAKTDEESASLNAKILGLQKKWSDFCQSLHHTQLLPEFDASQTRSQVPILGGFRFDSGLKESSSKYPSLDQIQCWLAG 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2804 550 Gene3D - 10 171 IPR036628 -
Glsi10g2804 550 ProSiteProfiles Clp repeat (R) domain profile. 8 181 IPR004176 -
Glsi10g2804 550 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 518 - -
Glsi10g2804 550 SUPERFAMILY Double Clp-N motif 12 118 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2804 Glsi-ChrGlsi10 51316381 51320093 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0349 08 3052588 3057760 Glsi10g2804 10 51316381 51320093 CCT
Glsi10g2804 10 51316381 51320093 Glsi10g2804 10 51316381 51320093 ECH
Glsi10g2804 10 51316381 51320093 Glsi10g1566 10 10460018 10464578 ECH
Glsi08g0349 08 3052588 3057760 Glsi10g2804 10 51316381 51320093 ECH
Glsi10g1566 10 10460018 10464578 Glsi10g2804 10 51316381 51320093 ECH
Glsi11g1176 11 7364678 7367774 Glsi10g2804 10 51316381 51320093 ECH