Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01891 ATGGCGGCAGAGCTACAAACCAAGCCCGAAACTGCCCTAGTTCCGGCTCCTGTTGTGGCTGAGGTGCCGCCAAACGACGCCGTTGCCGCCGACAAAACTTCTGAAACAGAGGAAGCCAAACCCACTACTCCTGCACCCGAGGAGACACCAGTTTCTGCAAACAAACAAAGCTCAAGAGCGACCGTTGATACGGATATCACTCTGGCAGAAGTAGAGAAAGAGAAAAAGTTGTCTTATGTGAAGGCATGGGAAGAAAGTGAAAAGGCCAAAGCAGAGAACAGAGCTGAAAAGCATTTCTGTGCTGTTGCTGCTTGGGAAAACGGCAAGAAGGCATCGCTTGAGGCTGAGCTGAAAAAAATTCAGGAACAACTGGAGAAAAAGAAGGCAGAATATGCTGAAAAAATGAAAAATAAGATGGCCTTAGTTCACAAGGAAGCGGAGGAGAAGAGGGCAGTGATTGAAGCCAAGCGTAAACAAGAACTTCTGAAGACACAGGAAATGGCTGAAAAATACCGTGCATCAGGAACCACTCCAAAGAAGACCATAGGATGCTTCTGA 558 0.4749 MAAELQTKPETALVPAPVVAEVPPNDAVAADKTSETEEAKPTTPAPEETPVSANKQSSRATVDTDITLAEVEKEKKLSYVKAWEESEKAKAENRAEKHFCAVAAWENGKKASLEAELKKIQEQLEKKKAEYAEKMKNKMALVHKEAEEKRAVIEAKRKQELLKTQEMAEKYRASGTTPKKTIGCF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01891 185 Pfam Remorin, C-terminal region 75 180 IPR005516 -
Cca07g01891 185 Coils Coil 103 141 - -
Cca07g01891 185 PANTHER CARBOXY-TERMINAL REGION REMORIN 3 185 - -
Cca07g01891 185 PANTHER OS02G0117200 PROTEIN 3 185 - -
Cca07g01891 185 Coils Coil 143 163 - -
Cca07g01891 185 MobiDBLite consensus disorder prediction 47 64 - -
Cca07g01891 185 MobiDBLite consensus disorder prediction 1 66 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01891 - - gmx:100305679 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01891 07 45900617 45905352 Cca02g02268 02 43215423 43217959 ECH
Cca07g01891 07 45900617 45905352 Cca06g01785 06 33161642 33164540 ECH
Cca07g01891 07 45900617 45905352 Cca07g01891 07 45900617 45905352 ECH
Cca06g01785 06 33161642 33164540 Cca07g01891 07 45900617 45905352 ECH
Cca07g01891 07 45900617 45905352 Cca01g02235 01 50549869 50554252 PCT