Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02268 ATGACAGAGGAGCAATCCAAAAAGGAAACTGAGAGTACTCCTTCTCATcctgaacctgaacctgaacctgaacctgaacATGTTGTTGATGACTCTCTAAAGGAGGATGTGGCTGAGGAGAAATCTGTAATTCCACAACCCTCTCATCCGGATAACAAGCCTGTTGATGACTCCAAAGCTCTTGCCATAGTTCAGACTAAGACTAATGAAGTTGCTGAAGAGAAGCCAATTGAGGAATCTGTGAACCGAGATGCGGTCCTTGCAAGAGTAGCAACCGAGAAGAGGCTGTCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCCAAAGCAGAGAACAAAGCTCACAAAAAGCTTTCAGCCATTTCAGCATGGGAGAATAGTAAGAAAGCTGCTACGGAGGCTGAATTGAGAAAGACTGAAGAACAACTGGAGAAGAAAAAGGCTGAATATGGAGAGAAATTGAAAAACCAAATAGCTACGATCCACCGAGAAGCCGAAGAAAAGAGGGCATTTATTGAGGCCAAAAAAGGAGAAGATTTCCTGAAGGCAGAGGAGACAGCTGCAAAGTACAGAGCAACTGGAACAGCCCCTAAGAAGCTCTTTGGTTGTTTCTAA 615 0.413 MTEEQSKKETESTPSHPEPEPEPEPEHVVDDSLKEDVAEEKSVIPQPSHPDNKPVDDSKALAIVQTKTNEVAEEKPIEESVNRDAVLARVATEKRLSLIKAWEESEKSKAENKAHKKLSAISAWENSKKAATEAELRKTEEQLEKKKAEYGEKLKNQIATIHREAEEKRAFIEAKKGEDFLKAEETAAKYRATGTAPKKLFGCF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02268 204 PANTHER REMORIN 1.4 1 204 - -
Cca02g02268 204 Pfam Remorin, C-terminal region 94 199 IPR005516 -
Cca02g02268 204 PANTHER OS02G0117200 PROTEIN 1 204 - -
Cca02g02268 204 MobiDBLite consensus disorder prediction 1 42 - -
Cca02g02268 204 Pfam Remorin, N-terminal region 35 90 IPR005518 -
Cca02g02268 204 MobiDBLite consensus disorder prediction 1 60 - -
Cca02g02268 204 Coils Coil 129 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02268 Cca-Chr2 43215423 43217959 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02268 - - gmx:100791464 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02268 02 43215423 43217959 Cca06g01785 06 33161642 33164540 ECH
Cca07g01891 07 45900617 45905352 Cca02g02268 02 43215423 43217959 ECH
Cca06g01785 06 33161642 33164540 Cca02g02268 02 43215423 43217959 ECH
Cca02g02268 02 43215423 43217959 Cca02g02268 02 43215423 43217959 ECH
Cca02g02268 02 43215423 43217959 Cca08g00643 08 11659488 11663023 PCT