Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01785 ATGGGAGAAGAGGTGCCCAACAAAACAGAATCACACTCACCCTCTCAGGAAGACCTTTCCATCAAAACCCAACCCCTGACAAACTCCGAGGAAGACCTTTCAAACAAAACCGAACCACTTCCAAACTCTGAGGAAGAGCTTTCCAACAAAACCCAACCACAGCCAAACTCTGTTTCCCAGGAAAAGGAATCGGAGAAACCTGACCCTCCAAACCAGAACGTCACTTCTCCTTCTCCCCTTCTTCAAAATGTTGCGGATCAAGCTGATAAAAAGGATGCAGGGGATTCAGTGGGCAAAGATGTTTTGCTTGCACGAGTTGTAACAGAGAAAAGATTGGCTTTAATTAAAGCGTGGGAAGAAAGTGAAAAGACAAAAGCAGAGAACAGGGCATACAAGAAGCACTCTGCTATTGGATTATGGGAGGATAGCAAGAAAGCATCAGTAGAAGCACAACTCAAGAAAATTGAGGAAGACTTGGAAAAAAAGAAGGCTGAGTATGTTGAAAAAATGAAGAATAAAGTTGCTGAAATCCACCGATTAGCAGAAGAGAAAAGGGCAATTGTTGAGGCTCAGAGAAGGGAAGAATTCCTGGACCTAGAGGAGACAGCTGGAAAGTTTCGTAGCCGTGGTAATACACCAAGGAGATTCTTTTCATGCTTGAGCGGCTAA 669 0.4395 MGEEVPNKTESHSPSQEDLSIKTQPLTNSEEDLSNKTEPLPNSEEELSNKTQPQPNSVSQEKESEKPDPPNQNVTSPSPLLQNVADQADKKDAGDSVGKDVLLARVVTEKRLALIKAWEESEKTKAENRAYKKHSAIGLWEDSKKASVEAQLKKIEEDLEKKKAEYVEKMKNKVAEIHRLAEEKRAIVEAQRREEFLDLEETAGKFRSRGNTPRRFFSCLSG 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01785 222 PANTHER OS02G0117200 PROTEIN 43 221 - -
Cca06g01785 222 PANTHER CARBOXY-TERMINAL REGION REMORIN 43 221 - -
Cca06g01785 222 MobiDBLite consensus disorder prediction 1 100 - -
Cca06g01785 222 Coils Coil 145 200 - -
Cca06g01785 222 MobiDBLite consensus disorder prediction 69 83 - -
Cca06g01785 222 Pfam Remorin, C-terminal region 110 214 IPR005516 -
Cca06g01785 222 MobiDBLite consensus disorder prediction 8 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01785 Cca-Chr6 33161642 33164540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01785 - - ccaj:109801015 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01785 06 33161642 33164540 Cca06g01785 06 33161642 33164540 ECH
Cca02g02268 02 43215423 43217959 Cca06g01785 06 33161642 33164540 ECH
Cca07g01891 07 45900617 45905352 Cca06g01785 06 33161642 33164540 ECH
Cca06g01785 06 33161642 33164540 Cca02g02268 02 43215423 43217959 ECH
Cca06g01785 06 33161642 33164540 Cca07g01891 07 45900617 45905352 ECH