Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02235 ATGGCAGACCTCCAGACCAAGGCTGAACCCGGTTCGCTTCCAGCTCCGCCACCGCTGCTTGACGCCGCTGAGAAAAAAGTGGTGGCGGCGCCACCACCGCCTGCTCCGGCAGCGGCAGAGGAATCCAAAGCTCTTGCTGTTGTGGAGAGTGAGAAGATACCAGATCCTGTAAAAAAGAAGGCCACAGGTGGATCCCTTGATAGAGATATTGCTCTTGCTGAAATAGAGAAAGAGAAAAGGTTGTCTAATGTGAAGGCATGGGAAGAAAGTGAAAAATCCAAAGCTGAGAATAAAGCCCAAAAGCAGCTCTCTGCTGTTGGTGCTTGGGAAAACAGCAAGAAAGCAGCTCTTGAAGCTCAGCTGAGAAAAATTGAGGAACAACTAGAGAAAAAGAAAGCTGAATATGGTGAAAAAATGAAGAACAAAATAGCCTTAGTTCACAAGCAAGCAGAGGAGAAGAGAGCAATGGTTGAAGCCAAGCGTGGTGAAGAAATTCTCAAGGCAGAGGAAACGGCTGCAAAATACCGTGCAACTGGAACCACTCCAAAGAAGGCCTTTGGATGCTTTTAA 570 0.4754 MADLQTKAEPGSLPAPPPLLDAAEKKVVAAPPPPAPAAAEESKALAVVESEKIPDPVKKKATGGSLDRDIALAEIEKEKRLSNVKAWEESEKSKAENKAQKQLSAVGAWENSKKAALEAQLRKIEEQLEKKKAEYGEKMKNKIALVHKQAEEKRAMVEAKRGEEILKAEETAAKYRATGTTPKKAFGCF 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02235 189 MobiDBLite consensus disorder prediction 1 43 - -
Cca01g02235 189 Coils Coil 114 141 - -
Cca01g02235 189 Pfam Remorin, N-terminal region 21 75 IPR005518 -
Cca01g02235 189 PANTHER CARBOXY-TERMINAL REGION REMORIN 12 189 - -
Cca01g02235 189 PANTHER OS02G0117200 PROTEIN 12 189 - -
Cca01g02235 189 Pfam Remorin, C-terminal region 79 184 IPR005516 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02235 - - gmx:100802984 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01891 07 45900617 45905352 Cca01g02235 01 50549869 50554252 PCT