Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00643 ATGACAGAAGAGCAACCTAAAAAGGTAGAGTTAGAATCACAACCACCACCTGCTCCTGCTCCTGCTGAGGCTGAACCTGTTCCTGAGGCTCCAAAGGATGTGGCTGAGGAGAAATCTGTGATTCCAGTGCCCTCTTCAGATGACAAGCCTGATGAGTCCAAGGCTCTTGTCTTGGTTGAGAAGACTGAAGAAGTTGATGAAGTGAAACCATCTGAAGGCTCTATAAATAGAGATGCTGTGCTTGCCAGAGTTGCAACTGAGAAGAGGCTATCACTAATCAAAGCATGGGAAGAAAGTGAAAAATCAAAAGCTGAAAATAAGGCTCACAAAAAGCTTTCAGCCATTTCAGCATGGGAAAACAGTAAGAAAGCTACAGTGGAGGCTGAACTGAAAAAGATTGAAGAACAATTGGAGAAGAAAAAGGCAGAATATGCAGAAAAAATAAAAAACAAAGTAGCTGCGATCCACAAGGAAGCTGAGGAAAGAAGAGCAACGATTGAGGCAAAGAAAGGGGAAGATCTTCTTAAAGCAGAGGAGACAGCTGCAAAGTATAGAGCAACTGGAACAGCTCCAAAGAAACTCCTTGGTTGTTTCTAA 597 0.4288 MTEEQPKKVELESQPPPAPAPAEAEPVPEAPKDVAEEKSVIPVPSSDDKPDESKALVLVEKTEEVDEVKPSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENKAHKKLSAISAWENSKKATVEAELKKIEEQLEKKKAEYAEKIKNKVAAIHKEAEERRATIEAKKGEDLLKAEETAAKYRATGTAPKKLLGCF 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00643 198 PANTHER REMORIN 1.4 2 198 - -
Cca08g00643 198 MobiDBLite consensus disorder prediction 29 53 - -
Cca08g00643 198 PANTHER OS02G0117200 PROTEIN 2 198 - -
Cca08g00643 198 Pfam Remorin, C-terminal region 88 193 IPR005516 -
Cca08g00643 198 Pfam Remorin, N-terminal region 32 84 IPR005518 -
Cca08g00643 198 MobiDBLite consensus disorder prediction 1 53 - -
Cca08g00643 198 MobiDBLite consensus disorder prediction 12 26 - -
Cca08g00643 198 Coils Coil 123 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00643 Cca-Chr8 11659488 11663023 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00643 - - gmx:100499700 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02268 02 43215423 43217959 Cca08g00643 08 11659488 11663023 PCT