Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00333 atggagagcacgcttaagtcgttgagagatggagaatctgtgctggacctcagcccaagatccaccgtcagtggcggtgttgaggatgtctacggtgaagatcgtgccaccgaggatcaactcgtcaccccttggactttctcagttgcCAGCGGGTACTCTTTGCTAAGGGATCCACAGTACAACAAAGGACTTGCTTTCACTGAGAAAGAGAGAGATGCACACTATTTGCGTGGTCTCTTACCTCCCTCTTGTAGCACCCAGCAACTTCAGGAGAAGAAACTTATGAACAATATCCGCCAATATGAAGTTCCCTTACAAAAGTACATGGCCATGATGGACCTTCAGGAGAGGAATGAAAGACTGTTTTACAAACTTCTTATTGACAATGTTGAGGAATTGCTCCCAATTGTATATACTCCAGTTGTTGGCGAGGCTTGCCAGAAATATGGCAGCATATTCAAGCGTCCACAAGGTCTATACATCAGTTTGAAAGAGAAGGGGAAAATTCTAGAGGTTTTGAAAAACTGGCCTGAGAGGAGTATTCAAGTTATTGTTGTAACTGATGGTGAGAGGATTTTGGGACTTGGAGATCTTGGATGCCAGggtatgggaattcctgttggtaaattggctttgtacacggcactaggaggagttcgtccttcagcgTGTTTACCAGTTACAATTGATGTGGGGACAAATAATGAACAATTACTGAATGATGAGTTTTACATTGGCCTCAGACAAAAGAGGGCAACTGGGAAGGAATATTATGATCTTCTGCATGAGTTCATGGCTGCAGTGAAGCAAAACTACGGAGAAAAAGTTCTTGTGCAGTTTGAAGACTTTGCAAATCACAACGCTTTCGAATTGCTTGCAAAATATGGTACAACTAATCTTGTTTTCAATGACGATATACAGGGGACTGCCTCTGTTGTTCTAGCTGGAGTTGtagcagccctgaagctcattggtggtaccctagctgagcatacattcctcttccttggtgctggagaaGCAGGAACTGGTATAGCAGAGCTAATTGCTCTTGAGATGTCGAAGCAGACTAAGACACCTATAGAAGAGACTCGCAAGAAGATATGGCTTGTAGACTCAAAGGGTTTAATTGTTAGTTCACGCGCAAATTCACTGCAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTCGGCACTCTCATAGATGCCGTTAAGgtaatcaagcctacagttctcattggatcatcaggagtagggaaaacatttacaaaggaagtaattgaggctatgacatCAAACAATGAAAAACCTCTCATTTTGGCTCTTTCCAATCCAACCTCACAGTCTGAGTGTACAGCTGAAGAGGCATACACATGGAGTGAGGGTCGTGCCATTTTTGCTAGTGGGAGTCCATTTGATCCTGTTGAATACAATGGCAAAGTTTATTATTCTGGCCAGTCAAACAATGCTTACATTTTCCCAGGCTTTGGTTTGGGTTTAGTAATGTCCGGAGCAATCCGAGTACATGATGATATGCTTCTAGCCGCCTCGGAATCCTTGGCCAAGCAAGTGACAGAGAAGGACTACGCAAAGGGTTTGACTTACCCACCTTTCTCTGATATCAGAAAAATTTCAGCCAACATAGCTGCAAATGTTGCTGCAAAGGCATATGAACTAGGCTTGGCTACACATCTTCCTCGTCCTGAGAATCTTGTCAAGTATGCTGAGAGTTGCATGTATACCCCTCTATACCGCAACTATAGGTGA 1776 0.3412 MESTLKSLRDGESVLDLSPRSTVSGGVEDVYGEDRATEDQLVTPWTFSVASGYSLLRDPQYNKGLAFTEKERDAHYLRGLLPPSCSTQQLQEKKLMNNIRQYEVPLQKYMAMMDLQERNERLFYKLLIDNVEELLPIVYTPVVGEACQKYGSIFKRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPVTIDVGTNNEQLLNDEFYIGLRQKRATGKEYYDLLHEFMAAVKQNYGEKVLVQFEDFANHNAFELLAKYGTTNLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHTFLFLGAGEAGTGIAELIALEMSKQTKTPIEETRKKIWLVDSKGLIVSSRANSLQHFKKPWAHEHEPVGTLIDAVKVIKPTVLIGSSGVGKTFTKEVIEAMTSNNEKPLILALSNPTSQSECTAEEAYTWSEGRAIFASGSPFDPVEYNGKVYYSGQSNNAYIFPGFGLGLVMSGAIRVHDDMLLAASESLAKQVTEKDYAKGLTYPPFSDIRKISANIAANVAAKAYELGLATHLPRPENLVKYAESCMYTPLYRNYR 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00333 591 PIRSF ME 22 591 IPR001891 GO:0004470|GO:0004471
Car06g00333 591 ProSitePatterns Malic enzymes signature. 303 319 IPR015884 GO:0004471
Car06g00333 591 Gene3D - 50 304 IPR037062 GO:0004471
Car06g00333 591 PANTHER MALIC ENZYME 4 591 - -
Car06g00333 591 PANTHER MALIC ENZYME-RELATED 4 591 - -
Car06g00333 591 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 29 306 IPR046346 -
Car06g00333 591 Gene3D - 305 591 - -
Car06g00333 591 CDD NAD_bind_1_malic_enz 307 585 - -
Car06g00333 591 Pfam Malic enzyme, NAD binding domain 307 559 IPR012302 GO:0051287
Car06g00333 591 MobiDBLite consensus disorder prediction 1 27 - -
Car06g00333 591 PRINTS Malic enzyme signature 122 146 IPR001891 GO:0004470|GO:0004471
Car06g00333 591 PRINTS Malic enzyme signature 182 211 IPR001891 GO:0004470|GO:0004471
Car06g00333 591 PRINTS Malic enzyme signature 218 240 IPR001891 GO:0004470|GO:0004471
Car06g00333 591 PRINTS Malic enzyme signature 278 296 IPR001891 GO:0004470|GO:0004471
Car06g00333 591 PRINTS Malic enzyme signature 303 319 IPR001891 GO:0004470|GO:0004471
Car06g00333 591 PRINTS Malic enzyme signature 334 350 IPR001891 GO:0004470|GO:0004471
Car06g00333 591 PRINTS Malic enzyme signature 437 453 IPR001891 GO:0004470|GO:0004471
Car06g00333 591 SMART Malic_M_2 307 560 IPR012302 GO:0051287
Car06g00333 591 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 307 590 IPR036291 -
Car06g00333 591 SMART malic_2 116 297 IPR012301 GO:0004471
Car06g00333 591 Pfam Malic enzyme, N-terminal domain 116 296 IPR012301 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00333 Car-Chr6 3557703 3563071 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00333 K00029 - gmx:100782096 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00333 06 3557703 3563071 Car07g03161 07 58858468 58863993 ECH
Car06g00333 06 3557703 3563071 Car01g02751 01 52883655 52889511 ECH
Car06g00333 06 3557703 3563071 Car05g03123 05 76019977 76025425 ECH
Car06g00333 06 3557703 3563071 Car06g00333 06 3557703 3563071 ECH