Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02751 ATGATCTCCTCAACCAGATGCAACTTCCTGAGTAACTCAGGATTAGGTGGGTGTGGTAACTTCTGTGGTGGACAGAAAAAGGGTTATGGTCCTTGGAGGGTGACTTGTATGTCTCCAATCAATGACAGAAACGGTAGTGTTGTGAATGTGATGGAGACACCTTTGAAAGAAATTAAGAAGGAGGCGGTGGTGGAGGATGTTGACAACAACCCGATCTCCGGTGGCGGTCCTCGGGATGTTTACGGCGAAGATAAGGCCACGGAGGATCACTTTGTTACTCCTTGGAGTGTTTCTGTCGCTAGTGGTTATACATTGTTGCGAGATCCCCACTTCAACAAAGGGCTGGCCTTCACCGAAAAAGAGAGGGATGCTCACTACTTGCGCGGTCTTCTTCCCCCGTCAGTTATTCCTCAAGAAACTCAGGTTAAGAAAATGATCCAGCACATACGCCAGTACCAAGTTCCGCTGCAGAAATATATGGCAATGATGGATCTTCAGGAAAGAAACGAGCGTCTGTTTTACAAACTTCTCATTGAACACGTTGAAGAATTACTCCCAGTTGTGTATACTCCAACTGTTGGTGAGGCTTGCCAGAAATACGGGAGCATTTTTATGCGCCCACAAGGTCTTTATATAAGTTTGAAAGAGAAGGGGAGGATTCTTGAAGTACTGAGGAATTGGCCTGAGAAGAACATTCAAGTCATAGTTGTGACTGACGGAGAACGGATATTGGGTCTAGGGGATCTAGGGTGTCAGggaatgggaataccggtgggaaaactttctttatacacggcactaggaggagttcgtccttccgctTGCTTGCCTATTACTATTGATGTGGGGACAAACAATGAGAAGCTGCTTAACGATGAATTATATATTGGACTAAAGCAAAGACGAGCAACCGGACAGGAATATTCTGAACTTATGCACGAATTTATGACTGCGGTCAAGCAAACTTACGGTGAAAAAGTCCTAATTCAGTTTGAAGACTTTGCAAACCACAATGCTTTTGATCTGCTTGAAAAATATAGATCGACACATCTGGTTTTCAACGATGATATTCAGGGAACGGCATCGGTTGTTCTTGCTGGACTAGTTGCAGCTTTGAAATTAGTCGGTGGAAACTTAGCTGACCACAGATTTTTATTCCTTGGTGCTGGAGAGGCGGGCACTGGAATCGCAGAACTCATTGCACTTGAAACATCTAAACAGACAAATGCCCCGTTAGAAGAAGTGCGCAAGAATATTTGGTTGGTGGACTCAAAGGGATTGATTGTCAGTTCCCGTAAAGACTCACTTCAACATTTCAAGAAGCCGTGGGCTCATGAACATGAACCTGTTAAAAACCTTCTCGATGCTGTGAAGCAAATTAAGCCAACTGTGCTTATCGGAACATCGGGACAAGGAAGAACTTTTACGAAAGAGGTCATTGAGGCAATGGCTTCCATTAACGAGAAACCTATCATTCTTTCTCTTTCGAACCCAACGTCACAGTCCGAATGTACCGCCGAAGAAGCTTATAAGTGGAGCAAGGGACGTGCCATTTTTGCAAGTGGTAGCCCATTCCCGCCGGTGGAATACAAAGGAAAAGTGTTTGTGCCTGGCCAGGCAAATAATGCATACATATTCCCTGGGTTCGGCCTAGGTTTAATAATGTCCGGGACCATTCGCGTGCATGACGACCTGCTTCTGGCCGCCTCTGAGGCATTGGCTGGAGAAGTATCAGAAGAGAACTTTGAGAAGGGTCTGATATTCCCACCATTCACTGACATCAGAAAGATATCAGCTCAAATAGCTGCTAAAGTTGCTGCTAAGGCTTATGAGCTTGGCTTGGCCACTCGCCTACCACAGCCGAAAGATTTGGTGAAGTTTGCTGAGAGCTGTATGTATACACCAGCCTACAGAAGCTACCGGTGA 1926 0.4382 MISSTRCNFLSNSGLGGCGNFCGGQKKGYGPWRVTCMSPINDRNGSVVNVMETPLKEIKKEAVVEDVDNNPISGGGPRDVYGEDKATEDHFVTPWSVSVASGYTLLRDPHFNKGLAFTEKERDAHYLRGLLPPSVIPQETQVKKMIQHIRQYQVPLQKYMAMMDLQERNERLFYKLLIEHVEELLPVVYTPTVGEACQKYGSIFMRPQGLYISLKEKGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLNDELYIGLKQRRATGQEYSELMHEFMTAVKQTYGEKVLIQFEDFANHNAFDLLEKYRSTHLVFNDDIQGTASVVLAGLVAALKLVGGNLADHRFLFLGAGEAGTGIAELIALETSKQTNAPLEEVRKNIWLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVKNLLDAVKQIKPTVLIGTSGQGRTFTKEVIEAMASINEKPIILSLSNPTSQSECTAEEAYKWSKGRAIFASGSPFPPVEYKGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAGEVSEENFEKGLIFPPFTDIRKISAQIAAKVAAKAYELGLATRLPQPKDLVKFAESCMYTPAYRSYR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02751 641 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 84 356 IPR046346 -
Car01g02751 641 CDD NAD_bind_1_malic_enz 357 635 - -
Car01g02751 641 PIRSF ME 57 641 IPR001891 GO:0004470|GO:0004471
Car01g02751 641 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Car01g02751 641 Gene3D - 355 641 - -
Car01g02751 641 SMART Malic_M_2 357 610 IPR012302 GO:0051287
Car01g02751 641 Pfam Malic enzyme, NAD binding domain 357 609 IPR012302 GO:0051287
Car01g02751 641 ProSitePatterns Malic enzymes signature. 353 369 IPR015884 GO:0004471
Car01g02751 641 SMART malic_2 166 347 IPR012301 GO:0004471
Car01g02751 641 PRINTS Malic enzyme signature 172 196 IPR001891 GO:0004470|GO:0004471
Car01g02751 641 PRINTS Malic enzyme signature 232 261 IPR001891 GO:0004470|GO:0004471
Car01g02751 641 PRINTS Malic enzyme signature 268 290 IPR001891 GO:0004470|GO:0004471
Car01g02751 641 PRINTS Malic enzyme signature 328 346 IPR001891 GO:0004470|GO:0004471
Car01g02751 641 PRINTS Malic enzyme signature 353 369 IPR001891 GO:0004470|GO:0004471
Car01g02751 641 PRINTS Malic enzyme signature 384 400 IPR001891 GO:0004470|GO:0004471
Car01g02751 641 PRINTS Malic enzyme signature 487 503 IPR001891 GO:0004470|GO:0004471
Car01g02751 641 Pfam Malic enzyme, N-terminal domain 166 347 IPR012301 GO:0004471
Car01g02751 641 Gene3D - 100 354 IPR037062 GO:0004471
Car01g02751 641 PANTHER MALIC ENZYME-RELATED 71 641 - -
Car01g02751 641 PANTHER NADP-DEPENDENT MALIC ENZYME 4, CHLOROPLASTIC 71 641 - -
Car01g02751 641 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 357 640 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02751 Car-Chr1 52883655 52889511 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02751 K00029 - gmx:100791514 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03161 07 58858468 58863993 Car01g02751 01 52883655 52889511 ECH
Car06g00333 06 3557703 3563071 Car01g02751 01 52883655 52889511 ECH
Car01g02751 01 52883655 52889511 Car01g02751 01 52883655 52889511 ECH
Car01g02751 01 52883655 52889511 Car05g03123 05 76019977 76025425 ECH
Car01g02751 01 52883655 52889511 Car07g03161 07 58858468 58863993 PCT