Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00601 ATGGCGAAAAGTTCCTTTAAGCTTGAGCATCCATTCGAAAGAAGACAGACCGAAGCTGCTGGCATCAGAGAGAAGTATCCTGATCGAATAGCTGTGAATGTGGAGAAAGCTGAGAGAAGTGACTTTCCAGATATTGATAAGAAGTACCTTGTTCCAGCTGATTTTACTGTTGGTCAGTTTGTTTATGTTGTCCGTAAAAGGATTAAGCTCAGTGCTGAGAAGGCAATATTTGTGTTCATCAATAACACTCTACCACCAACTGCTGCCTTGATGTCTGCAATTTATGAGGAAAATAAGGATGATGATGGCTTTCTTTACATGACGTACAGTGGAGAGAACACCTTTGGATCCATCTA 356 0.4101 MAKSSFKLEHPFERRQTEAAGIREKYPDRIAVNVEKAERSDFPDIDKKYLVPADFTVGQFVYVVRKRIKLSAEKAIFVFINNTLPPTAALMSAIYEENKDDDGFLYMTYSGENTFGSI 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00601 118 CDD Ubl_ATG8 12 113 - -
Bva14g00601 118 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 116 IPR004241 -
Bva14g00601 118 Pfam Autophagy protein Atg8 ubiquitin like 14 116 IPR004241 -
Bva14g00601 118 Gene3D - 1 116 - -
Bva14g00601 118 PANTHER AUTOPHAGY-RELATED PROTEIN 1 116 - -
Bva14g00601 118 SUPERFAMILY Ubiquitin-like 3 116 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00601 Bva-Chr14 2833037 2834903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00601 K08341 - dct:110104058 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00601 14 2833037 2834903 Bva14g00601 14 2833037 2834903 ECH
Bva14g00601 14 2833037 2834903 Bva13g00508 13 2314480 2321858 ECH
Bva09g00486 09 2581074 2583709 Bva14g00601 14 2833037 2834903 ECH
Bva07g02151 07 18147096 18149153 Bva14g00601 14 2833037 2834903 ECH