Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02151 ATGCTAACGTTGTCGGTGATTCGCCCTgtattctttctatttctttgtaaCGTTTTAGGGTTCTTGAACCCTTTTTGCTCTCTCGTTTCAATTCTTGCCATGGCTAAGAGTTCATTCAAGATGGAACACCCTCTTGAAAGGAGGCAGGCTGAAGCAGCTCGCATCAGAGAAAAGTATCCTGATAGAATACCAGTGATTGTGGAAAGGGCTGAAAAAAGTGACGTTCCtgaaattgataagaaaaaGTATCTGGTTCCTGCTGATCTGACTGTCGGCCAGTTTGTATATGTGGTGCGAAAGAGAATCAAGTTGAGTCCTGAGAAGGCcatcttcatttttgttaAGAACATTCTACCGCCAACTGCGTCTATGATGTCTGCAATTTACGAGGAGAATAAGGACGAAGATGGATTCCTTTACATGACTTACAGTGGGGAGAACACATTTGGGATGTTCTG 458 0.3974 MLTLSVIRPVFFLFLCNVLGFLNPFCSLVSILAMAKSSFKMEHPLERRQAEAARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTASMMSAIYEENKDEDGFLYMTYSGENTFGMF 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02151 152 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 21 150 IPR004241 -
Bva07g02151 152 CDD Ubl_ATG8 45 147 - -
Bva07g02151 152 PANTHER AUTOPHAGY-RELATED PROTEIN 21 150 - -
Bva07g02151 152 Gene3D - 29 151 - -
Bva07g02151 152 SUPERFAMILY Ubiquitin-like 36 150 IPR029071 -
Bva07g02151 152 Pfam Autophagy protein Atg8 ubiquitin like 47 150 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02151 Bva-Chr7 18147096 18149153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02151 K08341 - pop:7489899 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02151 07 18147096 18149153 Bva07g02151 07 18147096 18149153 ECH
Bva07g02151 07 18147096 18149153 Bva14g00601 14 2833037 2834903 ECH
Bva07g02151 07 18147096 18149153 Bva13g00508 13 2314480 2321858 ECH