Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00486 atgaAAGCGAAGGAAGAAGAGCAAAAGGATAGCACACAAGGGCCTACTAGTATGGGGAGttcgttctttcttttttctgtatcCTTTTTGGGGATATTGAATCCCTTCTCCTCTCTCGTTTGGTCTTTACCTGTTTTCGGCTGCAGACCGGTTGCCATGGCTAAGAGTTCATTCAAGATGGAACACCCCCTTGAAAGGAGGCAGGCTGAAGCAGCTCGCATCAGGGAAAAGTATCCCGATAGAATACCAGTGATTGTGGAAAGGGCTGAGAAGAGTGATGTTCCtgaaattgataagaaaaaGTATCTGGTTCCTGCTGATCTGACCGTCGGCCAGTTTGTGTATGTGGTGAGGAAGAGAATCAAGCTGAGTCCTGAGAAGGCcatcttcatttttgttaAGAGCATTCTACCGCCAACTGCGTCTCTGATGTCTGCAATTTACGAGGAGAACAAGGATGAAGATGGATTCCTTTACATGACTTACAGTGGGGAGAACACATTTGGGCTGATCCGAAAGTG 521 0.428 MKAKEEEQKDSTQGPTSMGSSFFLFSVSFLGILNPFSSLVWSLPVFGCRPVAMAKSSFKMEHPLERRQAEAARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKSILPPTASLMSAIYEENKDEDGFLYMTYSGENTFGLIRK 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00486 173 PANTHER AUTOPHAGY-RELATED PROTEIN 42 169 - -
Bva09g00486 173 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 42 169 IPR004241 -
Bva09g00486 173 Gene3D - 49 170 - -
Bva09g00486 173 SUPERFAMILY Ubiquitin-like 55 169 IPR029071 -
Bva09g00486 173 CDD Ubl_ATG8 64 166 - -
Bva09g00486 173 Pfam Autophagy protein Atg8 ubiquitin like 66 169 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00486 Bva-Chr9 2581074 2583709 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00486 K08341 - gmx:100301895 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00486 09 2581074 2583709 Bva09g00486 09 2581074 2583709 ECH
Bva09g00486 09 2581074 2583709 Bva14g00601 14 2833037 2834903 ECH
Bva09g00486 09 2581074 2583709 Bva13g00508 13 2314480 2321858 ECH