Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00508 ATGTTGGAATCTTCTTATGCCGGAAGCAATCTAAGTGAGACCCACCTGGGGCTTGGCTTTTCTGAACCATCTCCGAAATTCGAGGGCAATCGTAGTGCGAATTTCATCATGGCGAAAAGTTCCTTCAAGCTTGAGCATCCATTGGAAAGGAGACAGGCTGAAGCTGCTCGTATCAGAGAGAAGTATCCTGATAGAATACCGGTGATTGTGGAGAAAGCTGAAAGAAGTGACATTCCAGACATTGATAAGAAGAAATACCTTGTTCCTGCTGATTTGACTGTTGGCCAGTTTGTTTATGTTGTTCGTAAAAGGATTAAGCTCAGTGCAGAGAAGGCTATATTTGTTTTCATCAATAACGCTCTACCACCAACTGCTGCCTTGATGTCTGCAATTTATGAGGAACATAAAGATGATGATGGCTTTCTTTACATGACATACAGTGGAGAGAACACCTTTGGATCCATCTG 467 0.4261 MLESSYAGSNLSETHLGLGFSEPSPKFEGNRSANFIMAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFINNALPPTAALMSAIYEEHKDDDGFLYMTYSGENTFGSI 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00508 155 Gene3D - 26 153 - -
Bva13g00508 155 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 27 153 IPR004241 -
Bva13g00508 155 Pfam Autophagy protein Atg8 ubiquitin like 50 153 IPR004241 -
Bva13g00508 155 PANTHER AUTOPHAGY-RELATED PROTEIN 27 153 - -
Bva13g00508 155 SUPERFAMILY Ubiquitin-like 39 153 IPR029071 -
Bva13g00508 155 CDD Ubl_ATG8 48 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00508 Bva-Chr13 2314480 2321858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00508 K08341 - psom:113305160 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00508 13 2314480 2321858 Bva13g00508 13 2314480 2321858 ECH
Bva14g00601 14 2833037 2834903 Bva13g00508 13 2314480 2321858 ECH
Bva09g00486 09 2581074 2583709 Bva13g00508 13 2314480 2321858 ECH
Bva07g02151 07 18147096 18149153 Bva13g00508 13 2314480 2321858 ECH