Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01921 atggCGGAACTGATAGGTCCTCGGTTGTACAGCTGCTGTAATTGTAGAAACCATGTTTCACTTCATGATGATATAATTTCTAAGGCTTTCCAGggAAGAAATGGTCGAGCTTTTCTATTCTCGCATGCTATGAATATTGCGATAGGACCAAAAGAAGATAGGCATCTCATAACTGGCCTCCACACTGTTGCTGATGTGTACTGCGGAGACTGCCGTGAAGTGTTGGGTTGGAAGTATTTAAGAGCTTATGAAGCCTCACAGAAGTACAAGGAAGGGAAGTTCATACTTGAAAAGTCTAAAATTGTGAAGGAGAATTGGTA 320 0.4062 MAELIGPRLYSCCNCRNHVSLHDDIISKAFQGRNGRAFLFSHAMNIAIGPKEDRHLITGLHTVADVYCGDCREVLGWKYLRAYEASQKYKEGKFILEKSKIVKENW 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01921 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 106 IPR039058 -
Bva12g01921 106 PANTHER PROTEIN YIPPEE-LIKE 1 106 - -
Bva12g01921 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
Bva12g01921 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 102 IPR004910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01921 Bva-Chr12 15328113 15330394 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01921 - - qsu:112023683 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02076 02 21521331 21521942 Bva12g01921 12 15328113 15330394 ECH
Bva08g01954 08 13102289 13103093 Bva12g01921 12 15328113 15330394 ECH
Bva08g00020 08 116059 117853 Bva12g01921 12 15328113 15330394 ECH
Bva12g01921 12 15328113 15330394 Bva12g01921 12 15328113 15330394 ECH