Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01954 ATGGCGGATTTCACTGGACCACGGACCTATTGCTGCTTCAAGTGCCAGAATCTTGTTGCTTACCATGATGATATCGTTTCTAAAGATTTCCAGGCAAGCAATGGTAGagcttttctgttttctcatGTTATGAATGTTAAAGAAGGTGCCAAGGAGGATAGGCAGCTAACGACTGGTCTTCACACAGTGGCCGATGTTTTTTGCTGTGATTGTGGAGAGGATCTGGGTTGGAAGTATATAAAAGCTTACGAGGATACCCAGAAATATAAGGAAGGAAAATTCATACTAGTAAAGTACAAGATCACCAAGGGAAGTGGGTA 320 0.4031 MADFTGPRTYCCFKCQNLVAYHDDIVSKDFQASNGRAFLFSHVMNVKEGAKEDRQLTTGLHTVADVFCCDCGEDLGWKYIKAYEDTQKYKEGKFILVKYKITKGSG 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01954 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
Bva08g01954 106 PANTHER PROTEIN YIPPEE-LIKE 4 103 - -
Bva08g01954 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 9 103 IPR004910 -
Bva08g01954 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 4 103 IPR039058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01954 Bva-Chr8 13102289 13103093 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01954 - - gmx:100788878 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01954 08 13102289 13103093 Bva12g01921 12 15328113 15330394 ECH
Bva08g01954 08 13102289 13103093 Bva08g01954 08 13102289 13103093 ECH
Bva02g02076 02 21521331 21521942 Bva08g01954 08 13102289 13103093 ECH