Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02076 ATGGCAGATTTCCTTGGCTCACGGACCTATTGCTGCTTCAAGTGCCAGAATCTTGTTGCTTACCATGACGACATCGTTTCCAAAGATTTCCAGGCAAGCAATGGTAGAGCTTTTCTGTTCTCTCATCTTATGAATGTTAAAGAGGGTGCCAAGGAGGATAGGCAGCTGATCACTGGTCTTCACACAGTGGCTGATGTTTTTTGCCGTGATTGTGGAGAGGAACTGGGTTGGAAGTATATAAAAGCTTATGACGAAACCCAGAAGTATAAGGAAGGAAAATTCATACTAGGAAAGTTCAAGATCACCAAGGGAAATGGATA 320 0.4313 MADFLGSRTYCCFKCQNLVAYHDDIVSKDFQASNGRAFLFSHLMNVKEGAKEDRQLITGLHTVADVFCRDCGEELGWKYIKAYDETQKYKEGKFILGKFKITKGNG 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02076 106 Gene3D - 6 96 IPR038557 -
Bva02g02076 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 4 105 IPR039058 -
Bva02g02076 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 9 102 IPR004910 -
Bva02g02076 106 PANTHER PROTEIN YIPPEE-LIKE 4 105 - -
Bva02g02076 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02076 Bva-Chr2 21521331 21521942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02076 - - gmx:100788878 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02076 02 21521331 21521942 Bva12g01921 12 15328113 15330394 ECH
Bva02g02076 02 21521331 21521942 Bva02g02076 02 21521331 21521942 ECH
Bva02g02076 02 21521331 21521942 Bva08g01954 08 13102289 13103093 ECH