Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00020 ATGGCGGAGTTGATTGGACCCAGGTTGTACAGTTGCTGTAATTGTAGAAACCATGTTGCCCTTCACGATGATGTTATTTCCAAAGCTTTTCAGGGAAGAAATGGTCGGGCCTTTTTATTCTCGCATGCAATGAATGTTATGGTAGGGCCGAAGGAAGACAGGCAACTCATGACTGGCCTGCACACAGTTGCTGATGTCTATTGTTCCGATTGCCGTGAAGTGCTTGGTTGGAAGTATGAACGAGCCTATGAGGAAACGCAGAAGTATAAGGAAGGTAAATACATACTTGAGAAGTCAAAAATTGTCAAGGAAAACTGGTA 320 0.4375 MAELIGPRLYSCCNCRNHVALHDDVISKAFQGRNGRAFLFSHAMNVMVGPKEDRQLMTGLHTVADVYCSDCREVLGWKYERAYEETQKYKEGKYILEKSKIVKENW 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00020 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
Bva08g00020 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 102 IPR004910 -
Bva08g00020 106 PANTHER PROTEIN YIPPEE-LIKE 1 106 - -
Bva08g00020 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 106 IPR039058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00020 Bva-Chr8 116059 117853 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00020 - - oeu:111407659 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00020 08 116059 117853 Bva08g00020 08 116059 117853 ECH
Bva08g00020 08 116059 117853 Bva12g01921 12 15328113 15330394 ECH