Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00862 ATGGCTGCTTTTGTTGGATTCGCCACTACTTTGCTGTCTTTGTTCCTCTTCCAATTCTTATTAGGTGTCCATTCGGCAACATTCACAATTGTAAACCAGTGTAGCTACACAGTTTGGCCAGGCATTTTGTCGAGCGCTGGAACTGCACAACTCTCCACCACAGGCTTCGCCCTTCAGCCAGGCGAGTCCAATGCTCTGTCCGTGCCCACCGCCTGGTCCGGTCGCTTATGGGGTCGAACGCTTTGCTCCCAGGACTCCACTGGAAAGTTCGCCTGCGTCACCGGCGATTGCGGATCCTCCACCCTGGAATGCGCTGGTAGCGGTGCCGCCCCTCCGGCTACACTAGCAGAGTTTACGCTCAACGGAGCCGGTGGACTCGACTTCTACGACGTTAGTCTCGTAGACGGATACAACCTTCCGATGACGGTGGAACCTCAAGGTGGTACCCCTGGAGTTGGCAACTGTACCGTGACGGGTTGCAGGGTGGATTTGAACGGGAATTGTCCTACCGACTTGAAGGTTATGTCCGCCGGTGATGGGCAAGAGGGCGTGGCTTGTAAAAGCGCGTGCGAAGCCTTCGGTGATCCACAATATTGCTGCAGTGGCGCTTACGCGACGCCAGACACTTGCAAGCCCAGCACTTACTCGCAGTTTTTCAAAAGTGCCTGCCCACGCGCTTACAGCTACGCTTATGACGATGGCACCAGCACCTTCACTTGTGCCTCTGCCGATTACCTCATCACCTTCTGCCCCACTGGCTCCTCCACGAGTTTGATAAAGTCTGGAAATGGGAAATACCCAGTGGCGGTGGATATAACAGGAGCAGCAGATCATGTGATTTCGTCAGGGAAACTAATAATGGTGACTCTTTTGATGGCGGTTTGGCGTTTCTGGCAACAAGTGCTTTG 908 0.5419 MAAFVGFATTLLSLFLFQFLLGVHSATFTIVNQCSYTVWPGILSSAGTAQLSTTGFALQPGESNALSVPTAWSGRLWGRTLCSQDSTGKFACVTGDCGSSTLECAGSGAAPPATLAEFTLNGAGGLDFYDVSLVDGYNLPMTVEPQGGTPGVGNCTVTGCRVDLNGNCPTDLKVMSAGDGQEGVACKSACEAFGDPQYCCSGAYATPDTCKPSTYSQFFKSACPRAYSYAYDDGTSTFTCASADYLITFCPTGSSTSLIKSGNGKYPVAVDITGAADHVISSGKLIMVTLLMAVWRFWQQVL 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00862 302 PIRSF PR5 1 292 IPR001938 -
Bva08g00862 302 Pfam Thaumatin family 32 251 IPR001938 -
Bva08g00862 302 CDD TLP-PA 27 250 - -
Bva08g00862 302 Gene3D Thaumatin 26 251 IPR037176 -
Bva08g00862 302 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Bva08g00862 302 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Bva08g00862 302 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Bva08g00862 302 PRINTS Pathogenesis-related protein signature 241 250 IPR001938 -
Bva08g00862 302 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 14 268 - -
Bva08g00862 302 ProSiteProfiles Thaumatin family profile. 25 253 IPR001938 -
Bva08g00862 302 PANTHER OS03G0233200 PROTEIN 14 268 IPR001938 -
Bva08g00862 302 SMART tha2 28 251 IPR001938 -
Bva08g00862 302 SUPERFAMILY Osmotin, thaumatin-like protein 26 252 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00862 Bva-Chr8 4431626 4433489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00862 6 256 Receptor kinase-like Gene Family AT5G38280 51.779 3.86e-90 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00862 - - gmx:100806478 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00862 08 4431626 4433489 Bva11g01515 11 14412024 14414055 BWGD
Bva10g00929 10 6985308 6986906 Bva08g00862 08 4431626 4433489 ECH
Bva08g00862 08 4431626 4433489 Bva08g00862 08 4431626 4433489 ECH
Bva13g01577 13 9409540 9412995 Bva08g00862 08 4431626 4433489 ECH
Bva14g02317 14 19982198 19984541 Bva08g00862 08 4431626 4433489 ECH