Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01515 ATGGCTGCTTCTACTCGATTCGCCACCGCTTTGTTGTCTTTGTTCATCCTCCAGTTCCTATTAGGTTCGTATTCAGCAAAATTCACAATTGTAAACCAGTGCAGCTATACAGTTTGGCCAGGCATTTTGTCGAGCGCTGGAACTGCACAACTCTCCACCACCGGCTTTGCTCTTCAACCAGGCGAGTCTAATATTCTGTCCTTGCCCACCGCCTGGTCCGGTCGCTTATGGGGTCGAACGCTTTGCTCCCAGGACTCCACCGGAAAGTTCACCTGCATCACCGGTGACTGCGGCTCCTCCACCTTAGAATGCGCCGGTCGCGGTGCCGCCCCACCAGCTACACTAGCAGAGTTCACGCTTAACGGAGCCGGAGGGCTCGACTTCTACGACGTTAGCCTTGTAGACGGGTACAACCTTCCGATGACAGTGGAGCCTCAGGGCGGGACACCCGGAGCGGGGAATTGTACCACGACTGGCTGCGTGGTGGATTTGAACGGGAACTGTCCTACGGAGTTGAAGGTTACGTCGAGCGAGGATGGGCGAGAGAGCGTGGCTTGCAAAAGCGCATGCGAAGCCTTCCAGGACCCACAGTATTGCTGCAGTGGCGCTTACGCGACTCCAGACACTTGCAAGCCCAGCGCTTATTCGCAGTTTTTCAAATCTGCCTGCCCACGCGCTTACAGCTACGCTTATGACGATGGCAGCAGCACCTTCACTTGTGCCTCCGCAGATTACCTCATCACTTTCTGCCCCACCTCCTCCAAAAGTTCGATAAAATCTGGGAATGGAAAATACCCAGTGGCGATGGAGATCACAGGAGCAGCAAGCCATGTGGTTTTATCAGGCAAACTAATAATGCTGACTCTTGTGATGGCGGTTTGGCGCTTGTGGCAACAATCGCTTTA 905 0.5425 MAASTRFATALLSLFILQFLLGSYSAKFTIVNQCSYTVWPGILSSAGTAQLSTTGFALQPGESNILSLPTAWSGRLWGRTLCSQDSTGKFTCITGDCGSSTLECAGRGAAPPATLAEFTLNGAGGLDFYDVSLVDGYNLPMTVEPQGGTPGAGNCTTTGCVVDLNGNCPTELKVTSSEDGRESVACKSACEAFQDPQYCCSGAYATPDTCKPSAYSQFFKSACPRAYSYAYDDGSSTFTCASADYLITFCPTSSKSSIKSGNGKYPVAMEITGAASHVVLSGKLIMLTLVMAVWRLWQQSL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01515 301 CDD TLP-PA 27 250 - -
Bva11g01515 301 SUPERFAMILY Osmotin, thaumatin-like protein 27 251 IPR037176 -
Bva11g01515 301 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 15 268 - -
Bva11g01515 301 PIRSF PR5 1 292 IPR001938 -
Bva11g01515 301 Gene3D Thaumatin 26 251 IPR037176 -
Bva11g01515 301 PANTHER OS03G0233200 PROTEIN 15 268 IPR001938 -
Bva11g01515 301 Pfam Thaumatin family 32 251 IPR001938 -
Bva11g01515 301 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Bva11g01515 301 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Bva11g01515 301 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Bva11g01515 301 PRINTS Pathogenesis-related protein signature 241 250 IPR001938 -
Bva11g01515 301 SMART tha2 28 251 IPR001938 -
Bva11g01515 301 ProSiteProfiles Thaumatin family profile. 25 253 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01515 Bva-Chr11 14412024 14414055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01515 7 252 Receptor kinase-like Gene Family AT5G38280 51.406 3.05e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01515 - - gmx:100806478 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00862 08 4431626 4433489 Bva11g01515 11 14412024 14414055 BWGD