Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00929 ATGGATATTCACGTTTCCGGATATCTCTCGTTATACATTACTCTCATTTGGGTTATAATTCACAGAGGTGCATCAGGAACGACGTTTACTCTCGTTAACAAGTGTGATTACACAGTATGGCCAGGAATTCTGGCCAATGCAGGCAGCTCCACACTCGAGAGCACCGGATTTGAGCTCCAATCCGGTGGGTCTCGGAGTTTTCAAGCGCCACCCAATTGGTCCGGCAGATTCTGGGGCAGAACCGGTTGTAATTTCGATCAAAATACAGGACAGGGTAGCTGTGCCACCGGGGACTGTGGCTCCAATCAAATTGAGTGCAATGGCGCTGGAGCAAGCCCGCCCGCGTCACTTGCGGAGTTCGCAATCGGGTCGGGCACCACCCAGGATTTCTACGATGTCAGTTTGGTGGACGGTTACAATATAGCTATGCTAGTGGATACGAATGGAGGGTCCGGCTCATGCTCCTCTACTGGATGTTTGTCCGATTTGAATCAGCTGTGCCCGAATGAGTTACGGGTTGGGGGCCGTGCTGCTTGTAAGAGCGCGTGCGAGGCGTTTCGGAGCCCCGAATATTGCTGTAGTGGCGCGTATGATTCACCGGCGAGGTGCAAGCCGTCCGTTTATTCGCAGATATTCAAATCCGCGTGTCCCAAATCGTACAGCTATGCCTACGATGATGCTACGAGTACATTTACGTGCACAGCAGCAGATTATACCATCACATTCTGCCCTTCAACGACAAGCCAAAAATCGGCAAGGGATTCACCTCCTGCTGCAACTGGGTCTGAAACGGCTACATCTACTACAGGAGAGGTTCCAACGGTAACCGTTGACAGTCCATGGTTTCCCGACCTTTTCAGTGGACACACATGCAAGTGCAAGTCCCCGTCCTGCACATACTCCTTAATTGCTACTCTCACTGTGATATTCTTCTTGTGTAAGCATTACTA 950 0.5084 MDIHVSGYLSLYITLIWVIIHRGASGTTFTLVNKCDYTVWPGILANAGSSTLESTGFELQSGGSRSFQAPPNWSGRFWGRTGCNFDQNTGQGSCATGDCGSNQIECNGAGASPPASLAEFAIGSGTTQDFYDVSLVDGYNIAMLVDTNGGSGSCSSTGCLSDLNQLCPNELRVGGRAACKSACEAFRSPEYCCSGAYDSPARCKPSVYSQIFKSACPKSYSYAYDDATSTFTCTAADYTITFCPSTTSQKSARDSPPAATGSETATSTTGEVPTVTVDSPWFPDLFSGHTCKCKSPSCTYSLIATLTVIFFLCKHY 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00929 316 PANTHER OS03G0233200 PROTEIN 11 257 IPR001938 -
Bva10g00929 316 CDD TLP-PA 28 243 - -
Bva10g00929 316 ProSiteProfiles Thaumatin family profile. 26 244 IPR001938 -
Bva10g00929 316 PANTHER THAUMATIN-LIKE PROTEIN 1 11 257 - -
Bva10g00929 316 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Bva10g00929 316 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Bva10g00929 316 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Bva10g00929 316 PRINTS Pathogenesis-related protein signature 234 243 IPR001938 -
Bva10g00929 316 SMART tha2 29 244 IPR001938 -
Bva10g00929 316 Gene3D Thaumatin 27 244 IPR037176 -
Bva10g00929 316 MobiDBLite consensus disorder prediction 246 272 - -
Bva10g00929 316 Pfam Thaumatin family 33 244 IPR001938 -
Bva10g00929 316 SUPERFAMILY Osmotin, thaumatin-like protein 27 245 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00929 Bva-Chr10 6985308 6986906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00929 5 251 Receptor kinase-like Gene Family AT5G38280 47.082 1.05e-75 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00929 - - gmx:100786772 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00929 10 6985308 6986906 Bva08g00862 08 4431626 4433489 ECH
Bva10g00929 10 6985308 6986906 Bva10g00929 10 6985308 6986906 ECH