Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02360 ATGATCTCCTCCAGTAGATGCAGCTTCCtgAGCAACTCAGGTTATGCTGGGTCTGGCAGCTCCTTCTCTCGTGTGCAGAGAAGACATTCAGCTCCTTTCAGGGTGGTGGCTGTAGCTCCAACCAGCAGGTCGGGTGATAGAAACGGCAGCGTTGTGATGGATTTGAAAGACATAAAAGATGGTTCTGCAGTGCTTGACGTGGAGAATAATTCCACTGCCGGTGGCGGCGTTCAGGACGCGTACGTCGAGGATAGGGCTACAGAGGATCAATTTGTTACTCCATGGAGTGTTTCAGTTGCTAGTGGGTACTCTTTGTTGCGAGATCCACACCACAACAAAGGACTTGCCTTCagtgaaagagagagggaTGCCCACTACTTGCGTGGTCTTCTTCCCCCAACAGTTATTTCTCAAGAAACTCAGGTGAAGAAAATGATCCAGCATATGCGCCAGTACGACGTTCCATTGCATAAATACATGGCAATGATGAATCTTCAGGAGACAAATGAAAGGCTGTTTTACAAGCTTCTGATTGACCATGTTGAGGAGTTACTCCCAGTTGTTTATACTCCAACTGTTGGTGAAGCTTGTCAGAAATATGGGAGCATCTTTTTGAAACCTCAGGGTCTTTATATTAGTTTGAAAGAGAAGGGGAGGATTCATGAAGTACTGAGGAATTGGCCTGAGAAGGACATTCAAGTCATCGTTGTAACTGATGGGGAGCGGATCCTGGGTCTGGGGGATCTTGGCTGTCAGGGAATGGGAATACCAGTGGGAAAGCTTTCTTTGTATACTGCACTTGGAGGAGTTCGCCCTTCAGCTTGCTTGCCTATTACCATTGATGTGGGCACAAACAATGAGAAGCTGTTGAATGATGAATTATACATAGGACTCAAGCAAAGACGAGCAACTGGGCAGGAATACACTGAACTTATACATGAGTTTATGACTGCGGTCAAGCAAAATTATGGCGAAAATGTCCTCATTCAGTTTGAAGATTTCGCAAACCACAATGCTTTTGATCTACTTGAAAAATATGGCTCTACTCATCTTGTCTTCAATGATGATATTCAGGGAACAGCGTCAGTAGTACTTGCAGGACTAATGGCAGCTCTAAAAGTGGTGGGGGGAAACTTAGCTGACCACAGATTCTTATTCCTTGGGGCTGGAGAGGCTGGCACCGGAATAGCTGAACTCATAGCACTTGAAACTTCAAAACAGACAAATATGCCGCTGGAAGAAATCCGCAAGAACATTTGGTTGGTGGACTCAAAGGGACTGATTGTGAGTTCACGTAAGGAATCACTCCAACATTTTAAGAAGCCCTGGGCTCATGAGCACGAACCTGTTAAGGAACTTGTAGATGCCGTTAATaaaataaagcCAACGGTGCTGATTGGAACATCAGGACAAGGGAGAACTTTTACTAAAGAGGTAGTTGAAGCTATGGCCGACATCAATGAGAAACCTATCATTCTGGCTCTTTCAAATCCAACCTCACAAGCAGAATGTACTGCCGAAGAAGCTTACAAATGGAGCCAGGGACGAGCCATTTTTGCGAGTGGGAGCCCATTTCCGGCGGTTGAATACGATGGAAAAGTGTTTGTGCCTGGCCagGCAAATAATGCTTACATCTTCCCGGGATTGGGTCTTGGTTTGATAATGTCGGGAACAATCCGAGTGCACAATGACCTGCTTCTGGCAGCCTCGGAGGCGTTGGCTTCGCAGGTTAGCCAGGACAACTTTGACAAGGGACTCATATACCCACCATTCTCTAACATCAGAAACATTTCCGCACACATAGCTGCCAAAGTAGCTGCCAAGGCTTATGAGCTGGGCTTGGCCACTCGTCTTCCTCAGCctaaagatttggtccaatatgCTCACAGCTGTATGTATTCCCCAACCTACAGACCCTACCGGTG 1925 0.454 MISSSRCSFLSNSGYAGSGSSFSRVQRRHSAPFRVVAVAPTSRSGDRNGSVVMDLKDIKDGSAVLDVENNSTAGGGVQDAYVEDRATEDQFVTPWSVSVASGYSLLRDPHHNKGLAFSERERDAHYLRGLLPPTVISQETQVKKMIQHMRQYDVPLHKYMAMMNLQETNERLFYKLLIDHVEELLPVVYTPTVGEACQKYGSIFLKPQGLYISLKEKGRIHEVLRNWPEKDIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLNDELYIGLKQRRATGQEYTELIHEFMTAVKQNYGENVLIQFEDFANHNAFDLLEKYGSTHLVFNDDIQGTASVVLAGLMAALKVVGGNLADHRFLFLGAGEAGTGIAELIALETSKQTNMPLEEIRKNIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPVKELVDAVNKIKPTVLIGTSGQGRTFTKEVVEAMADINEKPIILALSNPTSQAECTAEEAYKWSQGRAIFASGSPFPAVEYDGKVFVPGQANNAYIFPGLGLGLIMSGTIRVHNDLLLAASEALASQVSQDNFDKGLIYPPFSNIRNISAHIAAKVAAKAYELGLATRLPQPKDLVQYAHSCMYSPTYRPYR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02360 641 PANTHER MALIC ENZYME-RELATED 14 641 - -
Bva02g02360 641 SMART Malic_M_2 357 610 IPR012302 GO:0051287
Bva02g02360 641 CDD NAD_bind_1_malic_enz 357 635 - -
Bva02g02360 641 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 357 641 IPR036291 -
Bva02g02360 641 Pfam Malic enzyme, NAD binding domain 357 609 IPR012302 GO:0051287
Bva02g02360 641 ProSitePatterns Malic enzymes signature. 353 369 IPR015884 GO:0004471
Bva02g02360 641 PIRSF ME 68 641 IPR001891 GO:0004470|GO:0004471
Bva02g02360 641 PRINTS Malic enzyme signature 268 290 IPR001891 GO:0004470|GO:0004471
Bva02g02360 641 PRINTS Malic enzyme signature 384 400 IPR001891 GO:0004470|GO:0004471
Bva02g02360 641 PRINTS Malic enzyme signature 232 261 IPR001891 GO:0004470|GO:0004471
Bva02g02360 641 PRINTS Malic enzyme signature 172 196 IPR001891 GO:0004470|GO:0004471
Bva02g02360 641 PRINTS Malic enzyme signature 353 369 IPR001891 GO:0004470|GO:0004471
Bva02g02360 641 PRINTS Malic enzyme signature 328 346 IPR001891 GO:0004470|GO:0004471
Bva02g02360 641 PRINTS Malic enzyme signature 487 503 IPR001891 GO:0004470|GO:0004471
Bva02g02360 641 SMART malic_2 166 347 IPR012301 GO:0004471
Bva02g02360 641 Pfam Malic enzyme, N-terminal domain 166 346 IPR012301 GO:0004471
Bva02g02360 641 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 86 356 IPR046346 -
Bva02g02360 641 Gene3D - 355 641 - -
Bva02g02360 641 Gene3D - 100 354 IPR037062 GO:0004471
Bva02g02360 641 PANTHER MALIC ENZYME 14 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02360 Bva-Chr2 23112225 23117448 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02360 K00029 - gmx:100791514 1095.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02192 08 14384791 14390084 Bva02g02360 02 23112225 23117448 BWGD
Bva08g02192 08 14384791 14390084 Bva02g02360 02 23112225 23117448 ECH
Bva03g00551 03 3192222 3196326 Bva02g02360 02 23112225 23117448 ECH
Bva04g00712 04 4681001 4685660 Bva02g02360 02 23112225 23117448 ECH
Bva02g02360 02 23112225 23117448 Bva02g02360 02 23112225 23117448 ECH
Bva02g02360 02 23112225 23117448 Bva10g00161 10 3099116 3103802 ECH