Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00551 ATGGAGAGCACACTCAGGGCTATCAGAGATGGAGAGTCGGTGCTGGACCTCAGCCCCAGGTCCACCGTCAGCGGTGGTGTTGAGGATATCTACGGCGAGGATCGCGCCACCGAGGATCAACTTGTCACCCCCTGGACTTTCTCAGTTGCCAGTGGCTACTCTTTGCTAAGGGATCCACAGTACAACAAAGGGCTTGCTTTTACTGAGAAAGAGAGGGATGCCCACTATTTGCGTGGACTCCTTCCTCCCATAGTCATCTCCCAACAACTTCAGGAGAAGAAGCTGATGCAGAACATCCGACAATATCAGGTTCCCTTGCAGAAGTATATGGCTTTGATGGACCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAACTTCTCATTGATAATGTTGAGGAATTGCTCCCAGTTGTATATACTCCTACTGTTGGTGAGGCCTGCCAGAAATATGGGAGCATCTTTAGACGCCCTCAGGGTCTTTACATAAGTTTGAAAGAGAAAGGAAAAATCCTTGAAGTATTGAAAAATTGGCCTGAGAGGAGTATTCAAGTTATTGTTGTAACTGATGGCGAACGGATTCTGGGACTTGGGGATCTTGGATGTCAGGGGATGGGAATTCCTGTTGGTAAATTGTCTTTGTATTCAGCACTTGGAGGAGTTCGTCCTTCTGCATGTTTACCTATAACAATTGATGTGGGGACAAACAACGAGTCATTACTGAAGGATGAGTTCTACATTGGGCTTAGACAAAAAAGGGCAACCGGGAAGGAGTACTCTGATCTTCTGCATGAATTCATGTGTGCTGTCAAGCAAAACTATGGAGAAAAAGTTCTTATACAGTTTGAAGACTTCGCAAATCACAATGCTTTTGAGTTGCTTGCAAAATATGGTACAACCCATCTTGTTTTCAATGATGATATACAGGGAACTGCTTCTGTTGTTCTTGCTGGGTTAGTTGCAGCACTGAAGCTAATTGGTGGTAGCCTGGCTGAGCACACATTTTTGTTCCTTGGCGCTGGAGAAGCTGGAACTGGCATAGCAGAGCTAATAGCTCTTGAGATATCTAAGCAGACCAAGGCACCTGTAGAAGAGTGTCGCAAGAAGATTTGGCTTGTAGACTCAAAGGGTTTAATTGTTAGTTCACGAAAGAATTCACTTCAACACTTCAAGCAGCCTTGGGCTCATGAACAAGAGCCTGTTAGCACTCTCTTAGATGCTGTCAAgCCAACAGTTCTGATTGGAACGTCCGGAGTGGGGAAAACGTTTACAAAGGAAGTAGTTGAGACTATTGCTTCCTTCAACGATAAACCTCTCATTTTCGCTCTCTCCAATCCAACCTCTCAGTCTGAATGTACAGCTGAAGAAGCTTATACATGGAGCCAGGGTCGTGCAACTTTTGCTAGTGGGAGTCCATTTGATCCTGTTGAATATAACGGCAAAGTTTATGTGCCTGGCCAGGCCAACAATTGTTACATCTTCCCAGGCTTTGGCTTGGGTTTAGTAATCTCAGGAGCCATCCGCGTACATGACGATATGCTTCTAGCTGCTTCGGAAGCATTGGCTAAACAAGTGACAGAGGAGAACTACAAACAGGGTTTGATTTACCCACCATTCTCTAATATCAGAAAAATTTCAGCAAACATAGCTGCCAGTGTTGCAGCCAAGGCATATGAGCTAGGCTTGGCTACTCATCTCCCTCGTCCTGCGAATCTTGTCAAGTATGCAGAGAGTTGCATGTACACCCCTGTCTACAGGCACTACCGCTA 1766 0.4541 MESTLRAIRDGESVLDLSPRSTVSGGVEDIYGEDRATEDQLVTPWTFSVASGYSLLRDPQYNKGLAFTEKERDAHYLRGLLPPIVISQQLQEKKLMQNIRQYQVPLQKYMALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGVRPSACLPITIDVGTNNESLLKDEFYIGLRQKRATGKEYSDLLHEFMCAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGLVAALKLIGGSLAEHTFLFLGAGEAGTGIAELIALEISKQTKAPVEECRKKIWLVDSKGLIVSSRKNSLQHFKQPWAHEQEPVSTLLDAVKPTVLIGTSGVGKTFTKEVVETIASFNDKPLIFALSNPTSQSECTAEEAYTWSQGRATFASGSPFDPVEYNGKVYVPGQANNCYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENYKQGLIYPPFSNIRKISANIAASVAAKAYELGLATHLPRPANLVKYAESCMYTPVYRHYR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00551 588 ProSitePatterns Malic enzymes signature. 303 319 IPR015884 GO:0004471
Bva03g00551 588 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 29 306 IPR046346 -
Bva03g00551 588 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 307 587 IPR036291 -
Bva03g00551 588 Pfam Malic enzyme, NAD binding domain 307 556 IPR012302 GO:0051287
Bva03g00551 588 Gene3D - 50 304 IPR037062 GO:0004471
Bva03g00551 588 SMART malic_2 116 297 IPR012301 GO:0004471
Bva03g00551 588 Gene3D - 305 588 - -
Bva03g00551 588 PRINTS Malic enzyme signature 122 146 IPR001891 GO:0004470|GO:0004471
Bva03g00551 588 PRINTS Malic enzyme signature 434 450 IPR001891 GO:0004470|GO:0004471
Bva03g00551 588 PRINTS Malic enzyme signature 182 211 IPR001891 GO:0004470|GO:0004471
Bva03g00551 588 PRINTS Malic enzyme signature 334 350 IPR001891 GO:0004470|GO:0004471
Bva03g00551 588 PRINTS Malic enzyme signature 218 240 IPR001891 GO:0004470|GO:0004471
Bva03g00551 588 PRINTS Malic enzyme signature 278 296 IPR001891 GO:0004470|GO:0004471
Bva03g00551 588 PRINTS Malic enzyme signature 303 319 IPR001891 GO:0004470|GO:0004471
Bva03g00551 588 PIRSF ME 23 588 IPR001891 GO:0004470|GO:0004471
Bva03g00551 588 PANTHER MALIC ENZYME-RELATED 15 588 - -
Bva03g00551 588 SMART Malic_M_2 307 557 IPR012302 GO:0051287
Bva03g00551 588 CDD NAD_bind_1_malic_enz 307 582 - -
Bva03g00551 588 Pfam Malic enzyme, N-terminal domain 116 296 IPR012301 GO:0004471
Bva03g00551 588 PANTHER MALIC ENZYME 15 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00551 Bva-Chr3 3192222 3196326 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00551 K00029 - gmx:100782096 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00551 03 3192222 3196326 Bva03g00551 03 3192222 3196326 BWGD
Bva03g00551 03 3192222 3196326 Bva08g02192 08 14384791 14390084 ECH
Bva03g00551 03 3192222 3196326 Bva02g02360 02 23112225 23117448 ECH
Bva03g00551 03 3192222 3196326 Bva10g00161 10 3099116 3103802 ECH
Bva03g00551 03 3192222 3196326 Bva03g00551 03 3192222 3196326 ECH