Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00712 ATGGAAAGTGCACTCAGGGCTATCAGAGATGGAGACTCGGTGCTGGACCTCAGCCCCAGATCCACCGTCGGCGGTGGTGTTGAGGATATCTACGGCGAGGACCGCGCCACCGAGGATCAACTTGTCACCCCTTGGAATTTCTCAGTTGCCAGTGGCTATTCTTTGCTGAGGGATCCTCAGTTCAATAAAGGGCTTGCTTTCACTGAAAAAGAGAGGGATGCCCACTATTTGCGTGGACTTCTTCCTCCCACAGTTTTCTCTCAACAACTCCAGGAGAAGAAACTGATGCACAACATCCGACAATATCAGGTCCCTTTGCAAAAGTACACGTCTCTGATGGAACTTCAGGAGAGGAATGAAAGGCTGTTTTACAAACTTCTCATTGATAATGTTGAGGAATTGCTCCCTATTGTATATACTCCTACCGTTGGTGAGGCCTGCCAGAAATATGGGAGCATCTTTAAACGCCCTCAGGGTCTATACATAAGTTTGAAAGAGAAAGGAAAAATCCTTGAGGTATTAAAGAACTGGCCTGAGAGGAGTATTCAAGTAATTGTGGTAACTGATGGTGAACGGATTTTGGGACTTGGAGATCTTGGATGTCAGGGTATGGGAATTCCTGTCGGTAAATTGTCTTTGTACACAGCACTTGGAGGCGTTCGTCCTTCTGCATGTTTACCTATAACAATTGATGTGGGGACAAACAATGAGACATTACTGAAGGATGATTTCTACATTGGGCTTAGACGAAAAAGGGCAACTGGGCAGGAGTACTCTGAACTTCTGCATGAATTCATGTGTGCTGTCAAGCAAAACTATGGAGAAAAAGTTCTTATACAGTTTGAAGACTTTGCAAATCACAATGCTTTTGATTTGCTTGCGAAATACGGTACTACCCATCTTGTGTTCAACGATGATATACAGGGAACTGCTTCTGTTGTTCTTGCTGGGCTGGTTGCAGCACTGAAGCTGATAGGCGGTACCCTGGCTGAAAACACATTCTTGTTCCTTGGTGCCGGAGAAGCTGGAACTGGCATAGCAGAGCTAATAGCTCTTGAGATATCTAAGCAGACCAAGGCACCAATAGAAGAGACTCGCAAGAAGATTTGGCTTGTAGATTCAAAGGGTCTGATTGAGCCTGTCAGCACTCTATTAGAGGCTGTTAAGATAATCAAGCCTACAGTTTTGATTGGAACATCCGGAAAGGGACAAACGTTTACAAAGGAAGTAGTTGAAGCTATGGCTTCCTTCAATGATAAACCTCTCATTTTGGCTCTCTCCAATCCAACCTCTCAGGCTGAGTGTACAGCTGAACAAGCCTATACGTGGAGCCAGGGTCGTGCAATTTTTGCTAGTGGGAGTCCATTTGATCCCGTTGAATATAACGGCAAAGTTTATGTTCCTGGCCAGGCCAACAATTGTTACATTTTCCCAGGCTTTGGTTTGGGTTTAGTAATCTCGGGAGCCATCCGTGTACATGACGATATGCTTCTAGCAGCTTCGGAAGCACTGGCAAAACAAGTGACAGAGGAGAACTACAAAAAAGGTTTGATTTACCCACCATTTgctaatataagaaaaatttcagCAAACATAGCTGCCAGTGTTGCTGCCAAGGCATATGAATTAGGGTTGGCCACACGTCTCCCTCGTCCGGAGAATCTTGTCAAGTATGCAGAGAGTTGCATGTACACCCCTGTCTACAGGAACTACCGCTA 1718 0.4488 MESALRAIRDGDSVLDLSPRSTVGGGVEDIYGEDRATEDQLVTPWNFSVASGYSLLRDPQFNKGLAFTEKERDAHYLRGLLPPTVFSQQLQEKKLMHNIRQYQVPLQKYTSLMELQERNERLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIFKRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNETLLKDDFYIGLRRKRATGQEYSELLHEFMCAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTTHLVFNDDIQGTASVVLAGLVAALKLIGGTLAENTFLFLGAGEAGTGIAELIALEISKQTKAPIEETRKKIWLVDSKGLIEPVSTLLEAVKIIKPTVLIGTSGKGQTFTKEVVEAMASFNDKPLILALSNPTSQAECTAEQAYTWSQGRAIFASGSPFDPVEYNGKVYVPGQANNCYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENYKKGLIYPPFANIRKISANIAASVAAKAYELGLATRLPRPENLVKYAESCMYTPVYRNYR 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00712 572 ProSitePatterns Malic enzymes signature. 303 319 IPR015884 GO:0004471
Bva04g00712 572 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 30 306 IPR046346 -
Bva04g00712 572 SMART Malic_M_2 307 541 IPR012302 GO:0051287
Bva04g00712 572 CDD NAD_bind_1_malic_enz 307 566 - -
Bva04g00712 572 PIRSF ME 28 382 IPR001891 GO:0004470|GO:0004471
Bva04g00712 572 PIRSF ME 378 572 IPR001891 GO:0004470|GO:0004471
Bva04g00712 572 Pfam Malic enzyme, N-terminal domain 116 296 IPR012301 GO:0004471
Bva04g00712 572 Gene3D - 381 572 - -
Bva04g00712 572 Gene3D - 305 380 - -
Bva04g00712 572 PRINTS Malic enzyme signature 122 146 IPR001891 GO:0004470|GO:0004471
Bva04g00712 572 PRINTS Malic enzyme signature 303 319 IPR001891 GO:0004470|GO:0004471
Bva04g00712 572 PRINTS Malic enzyme signature 218 240 IPR001891 GO:0004470|GO:0004471
Bva04g00712 572 PRINTS Malic enzyme signature 182 211 IPR001891 GO:0004470|GO:0004471
Bva04g00712 572 PRINTS Malic enzyme signature 334 350 IPR001891 GO:0004470|GO:0004471
Bva04g00712 572 PRINTS Malic enzyme signature 278 296 IPR001891 GO:0004470|GO:0004471
Bva04g00712 572 Gene3D - 50 304 IPR037062 GO:0004471
Bva04g00712 572 Pfam Malic enzyme, NAD binding domain 382 540 IPR012302 GO:0051287
Bva04g00712 572 Pfam Malic enzyme, NAD binding domain 307 379 IPR012302 GO:0051287
Bva04g00712 572 SMART malic_2 116 297 IPR012301 GO:0004471
Bva04g00712 572 PANTHER MALIC ENZYME 20 572 - -
Bva04g00712 572 PANTHER MALIC ENZYME-RELATED 20 572 - -
Bva04g00712 572 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 307 571 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00712 Bva-Chr4 4681001 4685660 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00712 K00029 - gmx:100782096 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00712 04 4681001 4685660 Bva08g02192 08 14384791 14390084 ECH
Bva04g00712 04 4681001 4685660 Bva02g02360 02 23112225 23117448 ECH
Bva04g00712 04 4681001 4685660 Bva10g00161 10 3099116 3103802 ECH
Bva04g00712 04 4681001 4685660 Bva04g00712 04 4681001 4685660 ECH