Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00530 ATGGCTCTGTTTTCGTACCACCGACATTCTTCTCAGCCCTTCTTCACTTTCTTCCTTTTCCTCCTCCTTAAAGGGGTTTCAGGTGCAACATTCACGTTCGTAAACAAGTGCGATCACACAGTATGGCCAGGGATCTTGGGCAAACCAGATATCGGAAGCACAGGTTTCGAGCTCTCAAAGGGTTCCACAAAGAGTTTCCAAGCTCCTACGGGCTGGTCGGGAAGATTCTGGGGCAGAACCGATTGCAAATTCGACGATCAAGGCAAAGGAACATGCGCCACCGCCGACTGCGGCTCCGGCGAGATCAACTGCAACGGAGGCGGAGCCTCTCCTCCGGCCACCCTCGCCGAGTTCACTCTCGGCACCGGTTCCATGGACTACTACGACGTCAGCCTCGTCGACGGCTACAATCTCCCCATGATGGTGGAGGCCAGCGGCGGCACCGGCTCGTGCGGCGCCACGGGATGCGGCGCTGACTTAAACAAGCGGTGCCCGTCGGAGCTTCGAGTGGAGGGCGGTGACGCGTGCCGCAGCGCGTGTGATGCATTCAAGAAACCGGAGTATTGCTGCGACGGAGAATTCGGAAACCCTAACACGTGTAAGCCATCTGTGTACTCTGAAATGTTCAAGAGTGCATGCCCCAAATCTTATAGCTATGCTTATGATGATGCCACCAGCACTTTCACTTGCTCCGATGCTGATTACACCATCACATTTTGTCCCTCTTCTCCGAGTCTAAAATCTTCTACGGATTCATCCCCCAAGGCAGCTGGTTCAGATTCGGGTTCGGATTTAGGGTCGGGGTCAGGTTCGTCGGTGGAGCAGTCGGCACTAGGTTCCACATCATGGCTAGCGGATATGGCTACGGCCACCGGGTCGGCGTCCACAAGAAGCAAGCCTTTTGGGGGATCAATTTTGGTGGCGGTTGCTTTCTTTCTTTCTCTTTTGCTAGCTTAG 957 0.5475 MALFSYHRHSSQPFFTFFLFLLLKGVSGATFTFVNKCDHTVWPGILGKPDIGSTGFELSKGSTKSFQAPTGWSGRFWGRTDCKFDDQGKGTCATADCGSGEINCNGGGASPPATLAEFTLGTGSMDYYDVSLVDGYNLPMMVEASGGTGSCGATGCGADLNKRCPSELRVEGGDACRSACDAFKKPEYCCDGEFGNPNTCKPSVYSEMFKSACPKSYSYAYDDATSTFTCSDADYTITFCPSSPSLKSSTDSSPKAAGSDSGSDLGSGSGSSVEQSALGSTSWLADMATATGSASTRSKPFGGSILVAVAFFLSLLLA 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00530 318 CDD TLP-PA 30 240 - -
Arst5g00530 318 SMART tha2 31 241 IPR001938 -
Arst5g00530 318 Gene3D Thaumatin 29 241 IPR037176 -
Arst5g00530 318 PANTHER OS03G0233200 PROTEIN 15 241 IPR001938 -
Arst5g00530 318 MobiDBLite consensus disorder prediction 244 274 - -
Arst5g00530 318 ProSiteProfiles Thaumatin family profile. 28 241 IPR001938 -
Arst5g00530 318 Pfam Thaumatin family 35 241 IPR001938 -
Arst5g00530 318 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Arst5g00530 318 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Arst5g00530 318 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Arst5g00530 318 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Arst5g00530 318 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Arst5g00530 318 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Arst5g00530 318 PRINTS Pathogenesis-related protein signature 231 240 IPR001938 -
Arst5g00530 318 SUPERFAMILY Osmotin, thaumatin-like protein 29 242 IPR037176 -
Arst5g00530 318 FunFam THAUMATIN-LIKE PROTEIN 1 29 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00530 Arst-Chr5 4403372 4404854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00530 18 245 Receptor kinase-like Gene Family AT5G38280 47.561 3.98e-71 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00530 - - gmx:100802906 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00530 5 4403372 4404854 Arst5g00530 5 4403372 4404854 ECH
Arst1g01042 1 10413555 10416075 Arst5g00530 5 4403372 4404854 ECH
Arst3g00814 3 5844424 5847002 Arst5g00530 5 4403372 4404854 ECH