Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1342 ATGGTGTTGAAGAGAAGGCTTGATTATGGGTTCAGGGGCTTTCAAGTCCCCACTATACCTAGACATCCTAGATCTGCAAGAAGGAGGGTTGCTTTCAAAAAACCATTTGAGGATGGCCAAGCTTGTGCTTTTGATCTACTGGCATCTTTAGCTGGCAAGTTGTTGCAGGAGGGTGAAAGTTCTGCTTCCAGCAATGCATCTGAAGGAAATCATCAACCTGCCTTTAGCCAATGTATGGAGCATGAAAAGCACAATGAAGTAAAACTATCAACAGAAGAGGGTAACCATAATGGATGTTGTGCAGAGAGTATTTTTATGACAGAAGTGGGCTCACAAAATTGTAGTGAGAAACCTCTTGAGTGTGTTGAGGCTGATAGTGTGTCAGAATGTGTTTCAGCTAAAAATAGTTCAGACTGTTGGGAAGAAGTTGAAGCTGAAGCTGGTATGAAGTCTGAAATTTTAAAGTGGAAGAATAAGTTTGGACATTATTCTAATGGATTAGTAGAAGTACCTGAAGATCAGGAAGCTGGCAGTTCAGACTTCAAGCAATTATATATGAACAATAAAGTTATTTTGAAGGATCCATTGGAGTTGTGTATTAACTCTCCTGCACTAGTTGACTCAAACAGTGACATTAAATCTCCATTTTGTACAGAACTGTTTCCCAATGCTTCCTTTTCTGGGCATGGGACTGATATAAAGTTAGGTTTTACAGATGATGACGAAAACTTTACAAGGTGCAACAAAGTTTGCACCAAGTCAAAAGCTTTTAGACCTCCACAATGCATTGCTCATCGCATAATTAGGAAACGGTTGACTACCAAACCCTGGAAGGTTGCACCAAAGTTGAAGGACTGCGAACATTCTAGTTTTGAATTTGCAGATGAGCGAGTAAAAACTCTGAATCGTAAGAGGAAGACTTGTTACAGTTTTGAAAGATCTCAGCATTACACGCATTTCAGGAGAAGGAAATTTTTTGACAGGGGTTCAGTGATAACTTCTGATGGAGGACTCAGCAGTGAGAGTGTATCTGATTTACCTGAGAAAGGAACTGATGGAAATAACCCTAGCTCATCTGGAAAACCTCAAGTACCTAAGGATTCTCATGGACTTGATGTTCTGTCCTTATGTACAGTGAAGTTTAGCATCAAGTCATTCAGGATACCAGCACTTTATGTTGAGGTTCCTGAAACTGCAACTGTTAGCTCATTAAAGAGGGCAGTCATGGATGCAGTGAAGACTATACTTGGAGGTGGAGTGCATGTTGGTGTTCTTGTTAAGGGGAAAAAAATTAGAGATGACAACAGAACTCTTCTGCAGACTGGCGTATCTTGTAAAGAAAATCTGGATAAACTCGGTTTCATGTTGGAGCCTAGTTCCTTTCAAGCTCCTGCTGTTTGTGTTGGTGATGCTTCTAAATGTGAAACATCTCAGCCTTCAAGGTCCCCAGAAACTCCTGTCTTTGATTCAGGGGTTGCCAATGCCTTACAGGATTCCTCCTTGCTGACAAATACTGCCAACCTCATTGAAATTAACCATGAGTCCACTTTTCCCACCACTGACGCCATAGGTGATAAATTAACACCAGATTCCAGAGCGCTAGTTGTTGTTTCAGATAGGAGTCCAGAAGCATTAGCTGTGGTTCCTGTGAATCAGAAAACCAGGCGTTCTGAGCTTGTACAGCGTCGAATTAGGAGACCATTCTCTGTGGCTGAAGTAGAAGCACTTGTTCAGGCAGTTGAGGAACTCGGAACTGGAAGGTGGCGTGATGTAAAGTTACAAGCTTTTGAAAGTGCAGACCATAGGACTTATGTTGACTTGAAGGATAAATGGAAAACATTGGTGCACACTGCAAAAATCTCTCCTCAACAAAGGAGAGGAGAGCCAGTTCCCCAAGGGCTATTGAACAGAGTTTTAGCTGCACATGCTTACTGGTCTCACCACCAAGCCAACCAGCATGGCAAGCATCAAGCTGAAAGACAGTGTTGA 1989 0.4198 MVLKRRLDYGFRGFQVPTIPRHPRSARRRVAFKKPFEDGQACAFDLLASLAGKLLQEGESSASSNASEGNHQPAFSQCMEHEKHNEVKLSTEEGNHNGCCAESIFMTEVGSQNCSEKPLECVEADSVSECVSAKNSSDCWEEVEAEAGMKSEILKWKNKFGHYSNGLVEVPEDQEAGSSDFKQLYMNNKVILKDPLELCINSPALVDSNSDIKSPFCTELFPNASFSGHGTDIKLGFTDDDENFTRCNKVCTKSKAFRPPQCIAHRIIRKRLTTKPWKVAPKLKDCEHSSFEFADERVKTLNRKRKTCYSFERSQHYTHFRRRKFFDRGSVITSDGGLSSESVSDLPEKGTDGNNPSSSGKPQVPKDSHGLDVLSLCTVKFSIKSFRIPALYVEVPETATVSSLKRAVMDAVKTILGGGVHVGVLVKGKKIRDDNRTLLQTGVSCKENLDKLGFMLEPSSFQAPAVCVGDASKCETSQPSRSPETPVFDSGVANALQDSSLLTNTANLIEINHESTFPTTDAIGDKLTPDSRALVVVSDRSPEALAVVPVNQKTRRSELVQRRIRRPFSVAEVEALVQAVEELGTGRWRDVKLQAFESADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQGLLNRVLAAHAYWSHHQANQHGKHQAERQC* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1342 662 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 561 619 IPR017930 -
Apr9g1342 662 SMART sant 564 617 IPR001005 -
Apr9g1342 662 Gene3D - 553 657 - -
Apr9g1342 662 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 659 IPR031105 -
Apr9g1342 662 MobiDBLite consensus disorder prediction 335 367 - -
Apr9g1342 662 SUPERFAMILY Homeodomain-like 562 652 IPR009057 -
Apr9g1342 662 CDD SANT_TRF 566 616 - -
Apr9g1342 662 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 659 - -
Apr9g1342 662 MobiDBLite consensus disorder prediction 335 364 - -
Apr9g1342 662 ProSiteProfiles Myb-like domain profile. 560 615 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1342 Apr-Chr9 23022166 23027267 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1342 - - lang:109356744 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1342 9 23022166 23027267 Apr10g2026 10 33101338 33106435 ECH
Apr4g1902 4 26923975 26929354 Apr9g1342 9 23022166 23027267 ECH
Apr2g2305 2 28008092 28013329 Apr9g1342 9 23022166 23027267 ECH
Apr3g0196 3 3662722 3668321 Apr9g1342 9 23022166 23027267 ECH
Apr9g1342 9 23022166 23027267 Apr9g1342 9 23022166 23027267 ECH