Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1902 ATGGTGTTGCAGAAGCGGTTGAACTATGGTTTTAATGGCTATCAGGTGCCTGTCATTCCTAAAGCTTCAAGGTCAGCTAGGGGGAGGGGCACAATCAGGAAGAAACCTGACAGTAGTCAGATTCAGGCATTTGAAATTTTGGCTAGTGTAGCTGGCAACTTTTTGCAGGAGAATGAGAGTTCAATTCCTGATAATGTCAGCCCTGCGAAAGATCCTCACGCATATGCTGGTATTATCATAAAGGACAAACATGAGGATGAAGGAGGGTCATTCAAGGGGGACCTATTTGAGCATGGAACTTGCAGTGAAATTGCCTCTGCCTGTGTTCTTAGTTTGCAAGGGAAACATGACAACCAAAGAGTCATGGGTGATTCATCTTTTCTTGGCAATCATCATCTTGAAGGCCAAGGACAGAATGTCCCTGAGAGGAAAGATGAAAGGATAAAAGGGAGAAGTGTAAATGAGAAAATCATCCACATCAAAGGAAGCTCTGATGGGTTAATTGAAACAGGCCAAAGAGCATCTAAAGATTGCAGTTCAGAAAATAACGTGGGAAAGACTTCGCTGGAAGGCCGCCGGCATCTTGATTCTTCACCCAATGGTTCCACTGCTAGGAAATTAGTTAATAGAGATGATGACGAAAACTTTGTTCAGTACACTCAACTGAACACCAAGAATAAGATATCTGGTGCACCACCAGATACGTTAAAATTGAAGGATGCAAGTCCTTTTATGAGTGATGAGAACAATAGTAGGGGCAATTCTGCACTTGAAAATTCCCAAAGGATGTATCCATTTAAGAAGAGGAAGTTCTTCAATCAGACCTCATCATCGGCGTCTGATAGGGGTTCTCAGTGTCAAGGCATATTTGATTCTTCTGACACAAAAGTTAATGGCACAAACCATGGCACAGCAATTGAAGAATCATCCTCTATAGCTGGAGCTGGTCAACAAGTTCATCCTGGGTCCAGGAGTTGTAATGTGAAGCTTAGCATAAAATCCTTTAAAGTCCCTGAGCTTTTTATTGATATACCTGAAACTGCAACTATTGGTTCACTGAAGAGGACCGTAATGGAGGCTGTGACAGCTATACTAGGAGATGAACTACATGTGGGCATTCTCCTTCAGGGAAAGAAAGTACGAGATGATAGCAAAACTCTGATCCAGACTGGGATATCTCAAGATGATAAACGTCATAGGTTGGGGTTCATGTTGGAGCCTAGACATACTCCAATTTCTCCATCTTCATACAATGAAGACCCTTGTTTTCTAACCACTGGTTCAAGACAAAAATTATCCAGGCAATCAACATCTTTGATGTTACAACAAGGAACATATAATGTGTCCCAAGAACGTTCTATGATCAAAATTGAAAGTTGTCCTGAGGGTGATCTTAATGTGGTTTCCTCTCTAGCAGATACTTCAGCTAACAATAACATGTCAAAGTGTCGCGCTCTGGTAGCAGTTCCTACCATTAACATGGAGGCATTAGCTGTGGTTCCATTCAGGCGCAAGTCTGGGAATCCTGACTTCGCACAGCGCCGAATCAGGAGGCCATTCTCTGTCCTAGAAGTAGAAGCACTGGTTCAGGCAGTTGAAAAACTTGGAACTGGAAGGTGGCGTGATGTCAAACAACGTGCTTTTGACAATGCAAAGCATCGAACCTATGTTGATTTGAAGGATAAGTGGAAGACATTGGTGCACACCGCAAGAATCTACCCTCAGCAAAGGAGGGGAGAACCTGTTCCACAGGAGCTTCTGGACAGGGTTTTGGCTGCTCATGCCTATTGGTCTCAACAACAATGTAAGCATCAACTTAAACCACTGTGA 1830 0.4306 MVLQKRLNYGFNGYQVPVIPKASRSARGRGTIRKKPDSSQIQAFEILASVAGNFLQENESSIPDNVSPAKDPHAYAGIIIKDKHEDEGGSFKGDLFEHGTCSEIASACVLSLQGKHDNQRVMGDSSFLGNHHLEGQGQNVPERKDERIKGRSVNEKIIHIKGSSDGLIETGQRASKDCSSENNVGKTSLEGRRHLDSSPNGSTARKLVNRDDDENFVQYTQLNTKNKISGAPPDTLKLKDASPFMSDENNSRGNSALENSQRMYPFKKRKFFNQTSSSASDRGSQCQGIFDSSDTKVNGTNHGTAIEESSSIAGAGQQVHPGSRSCNVKLSIKSFKVPELFIDIPETATIGSLKRTVMEAVTAILGDELHVGILLQGKKVRDDSKTLIQTGISQDDKRHRLGFMLEPRHTPISPSSYNEDPCFLTTGSRQKLSRQSTSLMLQQGTYNVSQERSMIKIESCPEGDLNVVSSLADTSANNNMSKCRALVAVPTINMEALAVVPFRRKSGNPDFAQRRIRRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFDNAKHRTYVDLKDKWKTLVHTARIYPQQRRGEPVPQELLDRVLAAHAYWSQQQCKHQLKPL* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1902 609 Gene3D - 506 608 - -
Apr4g1902 609 SMART sant 516 569 IPR001005 -
Apr4g1902 609 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 609 - -
Apr4g1902 609 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 609 IPR031105 -
Apr4g1902 609 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 512 571 IPR017930 -
Apr4g1902 609 MobiDBLite consensus disorder prediction 225 260 - -
Apr4g1902 609 MobiDBLite consensus disorder prediction 168 212 - -
Apr4g1902 609 CDD SANT_TRF 518 568 - -
Apr4g1902 609 SUPERFAMILY Homeodomain-like 518 599 IPR009057 -
Apr4g1902 609 ProSiteProfiles Myb-like domain profile. 512 567 IPR001005 -
Apr4g1902 609 MobiDBLite consensus disorder prediction 244 260 - -
Apr4g1902 609 SUPERFAMILY Ubiquitin-like 323 413 IPR029071 -
Apr4g1902 609 MobiDBLite consensus disorder prediction 168 186 - -
Apr4g1902 609 MobiDBLite consensus disorder prediction 273 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1902 Apr-Chr4 26923975 26929354 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1902 - - gmx:100801280 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1902 4 26923975 26929354 Apr9g1342 9 23022166 23027267 ECH
Apr4g1902 4 26923975 26929354 Apr10g2026 10 33101338 33106435 ECH
Apr4g1902 4 26923975 26929354 Apr4g1902 4 26923975 26929354 ECH
Apr4g1902 4 26923975 26929354 Apr2g2305 2 28008092 28013329 ECH
Apr4g1902 4 26923975 26929354 Apr3g0196 3 3662722 3668321 ECH