Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2305 ATGGTGGTGCAGAAGAGGCTAGACTATAGCTTTAATGGCAATGAGGTGCCAACCAAGCCCCGAACTCCACGATCAGCTAGGGGGAGGGCTACATTTCAAAGAAGGTTGGAAGACAATCAAATGTGTGCATTTGACTTATTGGCCACCATAGCTGGCAATTTATTGCAAGAAAAACAGAATCCATCAGCATCCAGTGATAGATCATCGGAAAAGGATAGACATGGATTTGTTAAAGAGGAGTGCCAGGATGCAAATAAACCATCAAGAGCTGAGCTTTCTGATGAAGGAAGTAGTGACAGAAAATGTTTCTCTAATCTTTCTTCACAAGCATACGATCAAAATTGTTCTGTGAAGGAACTTCCGCGTTGTGAAATTGATGGTCATTCATGCATTGCTTCTATAGTAACAAGTTCTAGTTGCTCAGAGAGGTTTGTTGCTGAGACACTGGTGGATGGAAAAAGCCAAAATGGAATGGAAAATTTTGCTGGCAAAGTTGAATTAGGTTCCTTTGGGTGTCCAGAGAATAGTGGTTGCAAGTTAGATAGTGATGTAAGTAAAGTAAAGGATGAGTTGCATAAGTTTGAGAAGGTTCCCATTGATAATGAGACTGGGATGTGCTGTTTTGAGGATCCCTTAAATGAAAAACCTCCAGCATTGATCAGCTTGGGTGGCAATGCCAAGTTGTCTGGGTATGATGACGGCATACCTTGTAGCTCATTGTCCAAAGGTTGTGACAGTGTACTAGTAGTTAGTAGAGATGATGACGAAAACTTTTCTGGGTGTGTTCACCCCAGTACCAAAATAAAGCCCCTTAGGCCAATTACTTGTATAGGTGATAGAAAAATCAAAAAAAGATTGGCTTCTAAATATTGTAAAGTAGCTCGAGAATCAAAGCATGATACCCTATCTAACGACGTTTTGGATGGAAATTTGAAGCCAGTTTACAGCAGTAGGAAGAACTATTATAAGCGCCAAAGATCTCAAATGAATATTCCTTTCAAAAAGAGGAAGCTTTTTAACTGTAGCTCTGTTACAAATTCTAACGGATATTTCAGAAGTGGTGGCACTTATTATTCACCTGAGAATGACATGAATCAAGGTGTTTCATGTTCATCTTCTGGGATGTGCAAAGGTCCTGGAATGTCATCCTTGGAAGCACATCAACACTCTGCATTACGATCTAGAGATTCTCATGTGAAGCTTAGGATCAAATCATTTAGAGTGCCGGAGCTTTTTATTGAGATTCCAGAAACTGCAACCATTGGATTCTTGAAGAAAACAGTGATGGAGGCAGTGACATCTGTACTTGGAGGTGGATTGCGTGTTGGCATGATTTTCCATGGAAAGAAGGTTAGAGATGACACTAAAACTCTACTTCAGACTGGAATTTCTCCTGATAACCAACTGGATGCTTTGGGCTTCACCTTGGAGCCTAATTCTTCACAAAACCTACCACCTGCATGTGCTACAGATTCTCTCCATGCTCATAGTGCAGATTTGCCTCAGCCTTTAATTGGGTATCTTTCCAGTCCAGCTGTAATTCATCAGAAGAGTCAAGGCTTTTTGGACATGTCGGGTGAGCATCAAGTAACCAGTTTAGGTAACCTTGTTGAAAGTGATCATGATTCAGCACCTTCTCCCATCAACAATTTGGTTGAAAAAAAAGTGACAGATTCCAAAGAACTTATTACTATTCCTGAGATGCGTGTGGAGGCACTAGCTGTGCTACCTGTGCACCAAAAGTCAAAACGAAATGAGATTGCACAGCGCCGAATTCGTAGACCTTTTTCTGTTGCTGAGGTGGAAGCACTGGTTCAAGCAGTTGAGAAACTGGGAACTGGAAGGTGGCGTGATGTTAAACTTCAAGCTTTTGATAATGCAAAGCATCGTACATATGTGGATTTGAAGGATAAATGGAAAACACTGGTGCACACGGCGAGAATATCCCCTCAGCAAAGGAGGGGAGAGCCTGTTCCTCAAGAACTTTTGGACAGGGTCTTAACTGCTCATGCATATTGGTCCCAGCAGCAAACTAAGCAACAGCTCAAGCAGCAGCCAAAAACTTGCCTTCTCCTTTAA 2079 0.417 MVVQKRLDYSFNGNEVPTKPRTPRSARGRATFQRRLEDNQMCAFDLLATIAGNLLQEKQNPSASSDRSSEKDRHGFVKEECQDANKPSRAELSDEGSSDRKCFSNLSSQAYDQNCSVKELPRCEIDGHSCIASIVTSSSCSERFVAETLVDGKSQNGMENFAGKVELGSFGCPENSGCKLDSDVSKVKDELHKFEKVPIDNETGMCCFEDPLNEKPPALISLGGNAKLSGYDDGIPCSSLSKGCDSVLVVSRDDDENFSGCVHPSTKIKPLRPITCIGDRKIKKRLASKYCKVARESKHDTLSNDVLDGNLKPVYSSRKNYYKRQRSQMNIPFKKRKLFNCSSVTNSNGYFRSGGTYYSPENDMNQGVSCSSSGMCKGPGMSSLEAHQHSALRSRDSHVKLRIKSFRVPELFIEIPETATIGFLKKTVMEAVTSVLGGGLRVGMIFHGKKVRDDTKTLLQTGISPDNQLDALGFTLEPNSSQNLPPACATDSLHAHSADLPQPLIGYLSSPAVIHQKSQGFLDMSGEHQVTSLGNLVESDHDSAPSPINNLVEKKVTDSKELITIPEMRVEALAVLPVHQKSKRNEIAQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLQAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQTKQQLKQQPKTCLLL* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2305 692 ProSiteProfiles Myb-like domain profile. 588 643 IPR001005 -
Apr2g2305 692 MobiDBLite consensus disorder prediction 58 98 - -
Apr2g2305 692 ProSiteProfiles Ubiquitin domain profile. 399 469 IPR000626 GO:0005515
Apr2g2305 692 SUPERFAMILY Homeodomain-like 594 675 IPR009057 -
Apr2g2305 692 MobiDBLite consensus disorder prediction 64 98 - -
Apr2g2305 692 MobiDBLite consensus disorder prediction 1 28 - -
Apr2g2305 692 CDD Ubl_ubiquitin_like 401 469 - -
Apr2g2305 692 SMART sant 592 645 IPR001005 -
Apr2g2305 692 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 588 647 IPR017930 -
Apr2g2305 692 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 692 IPR031105 -
Apr2g2305 692 SUPERFAMILY Ubiquitin-like 394 485 IPR029071 -
Apr2g2305 692 CDD SANT_TRF 594 644 - -
Apr2g2305 692 PANTHER TELOMERE REPEAT-BINDING PROTEIN 2-RELATED 1 692 - -
Apr2g2305 692 Gene3D - 581 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2305 Apr-Chr2 28008092 28013329 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2305 - - gmx:100792533 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2305 2 28008092 28013329 Apr2g2305 2 28008092 28013329 ECH
Apr2g2305 2 28008092 28013329 Apr9g1342 9 23022166 23027267 ECH
Apr2g2305 2 28008092 28013329 Apr10g2026 10 33101338 33106435 ECH
Apr2g2305 2 28008092 28013329 Apr3g0196 3 3662722 3668321 ECH
Apr4g1902 4 26923975 26929354 Apr2g2305 2 28008092 28013329 ECH
Apr2g2305 2 28008092 28013329 Apr3g0196 3 3662722 3668321 PCT