Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0038 ATGGGCACAGAGACCTTCCTATTCACCTCTGAATCCGTCAACGAGGGTCACCCTGACAAGTTGTGCGACCAAGTCTCCGATGCAGTGCTTGATGCCTGCCTTGAACAGGATCCTGACAGCAAGGTTGCCTGTGAGACATGCACAAAGACAAACATGGTCATGATCTTTGGAGAGATTACAACCAAGGCCAACATAGACTATGAGAAGATTGTTCGTGACACATGCCGCAACATAGGGTTTGTCTCTGATGATGTGGGTCTTGATGCTGACAAATGCAAGGTCTTGGTCAACATTGAGCAGCAAAGTCCTGATATTGCCCAAGGTGTGCACGGCCACTTCACCAAGCGTCCAGAAGAGGTTGGTGCTGGTGACCAGGGTCACATGTTTGGGTATGCCACTGATGAAACCCCTGAATACATGCCATTGAGCCATGTCCTTGCAACCAAACTAGGAGCTCGCCTCACTGAGGTTAGGAAGAATGGTACCTGTGCTTGGTTGAGACCGGATGGTAAGACACAAGTAACAGTAGAGTACTTCGATGACAATGGTGCAAGGGTTCCAGTTCGTGTCCACACTGTCCTCATTTCCACTCAGCATGATGAGACTGTCACTAATGAACAAATTGCTGCTGATCTTAAGGAGCATGTTATCAAGCCTGTGATTCCTGAGAAGTACTTAGATGACAAGACAATTTTCCACCTTAACCCATCTGGTAGATTTGTCATTGGTGGTCCTCATGGTGATGCTGGTCTCACAGGAAGAAAGATTATAATTGATACTTATGGAGGGTGGGGTGCTCATGGAGGTGGTGCTTTCTCAGGAAAGGACCCTACCAAGGTTGATAGAAGTGGTGCCTACGTTGCAAGACAAGCAGCGAAGAGTATTGTAGCAAATGGGCTTGCTCGGAGGTGTCTTGTTCAAGTTTCTTATGCCATTGGTGTTCCTGAGCCTTTGTCAGTTTTTATTAACTCTTATGGAACTGGAAAGATTCCTGACAAGGAGATTCTTAAGCTTGTGAAGGAAAATTTTGACTTTAGACCTGGAATGATCACGATTAACTTGGACCTTAAGAGGGGTGGCAACAGGTTCCTTAAGACAGCTGCCTATGGACACTTTGGAAGGGATGAGCCAGACTTCACCTGGGAAGTTGTCAAGCCACTCAAGTGGGAGAAGCCTCAGCCTCAGGCTTAA 1191 0.4702 MGTETFLFTSESVNEGHPDKLCDQVSDAVLDACLEQDPDSKVACETCTKTNMVMIFGEITTKANIDYEKIVRDTCRNIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYFDDNGARVPVRVHTVLISTQHDETVTNEQIAADLKEHVIKPVIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVANGLARRCLVQVSYAIGVPEPLSVFINSYGTGKIPDKEILKLVKENFDFRPGMITINLDLKRGGNRFLKTAAYGHFGRDEPDFTWEVVKPLKWEKPQPQA* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0038 396 ProSitePatterns S-adenosylmethionine synthase signature 2. 268 276 IPR022631 GO:0004478|GO:0006556
Apr8g0038 396 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 2 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Apr8g0038 396 ProSitePatterns S-adenosylmethionine synthase signature 1. 121 131 IPR022631 GO:0004478|GO:0006556
Apr8g0038 396 Gene3D - 119 382 - -
Apr8g0038 396 Pfam S-adenosylmethionine synthetase, N-terminal domain 6 103 IPR022628 GO:0004478|GO:0006556
Apr8g0038 396 Hamap S-adenosylmethionine synthase [metK]. 4 394 IPR002133 GO:0004478|GO:0005524|GO:0006556
Apr8g0038 396 Gene3D - 6 244 - -
Apr8g0038 396 CDD S-AdoMet_synt 7 385 - -
Apr8g0038 396 Gene3D - 13 281 - -
Apr8g0038 396 Pfam S-adenosylmethionine synthetase, C-terminal domain 242 382 IPR022630 GO:0004478|GO:0006556
Apr8g0038 396 SUPERFAMILY S-adenosylmethionine synthetase 5 111 IPR022636 GO:0004478|GO:0006556
Apr8g0038 396 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 2 393 - -
Apr8g0038 396 PIRSF MAT 1 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Apr8g0038 396 Pfam S-adenosylmethionine synthetase, central domain 119 240 IPR022629 GO:0004478|GO:0006556
Apr8g0038 396 SUPERFAMILY S-adenosylmethionine synthetase 117 241 IPR022636 GO:0004478|GO:0006556
Apr8g0038 396 SUPERFAMILY S-adenosylmethionine synthetase 242 391 IPR022636 GO:0004478|GO:0006556
Apr8g0038 396 TIGRFAM metK: methionine adenosyltransferase 7 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0038 Apr-Chr8 340535 343080 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0038 K00789 - pop:7495188 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0038 8 340535 343080 Apr8g0038 8 340535 343080 ECH
Apr9g2361 9 31219265 31221514 Apr8g0038 8 340535 343080 ECH
Apr1g2485 1 34453785 34457822 Apr8g0038 8 340535 343080 ECH
Apr4g0580 4 4813895 4816376 Apr8g0038 8 340535 343080 PCT