Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2485 ATGGCCATGGAGACATTCCTATTCACATCTGAATCAGTGAACGAGGGACACCCTGACAAGCTATGTGATCAGATCTCTGATGCTGTGCTCGATGCTTGCTTGGAACAAGACCCAGATAGCAAGGTTGCTTGTGAAACCTGCACCAAGACCAACATGGTGATGGTCTTTGGAGAGATCACAACCAAAGCCAACGTTGACTATGAGAAGATTGTGCGTGACACTTGCAGAAACATTGGGTTTGTGTCCGATGATGTTGGTCTTGATGCTGACAACTGCAAGGTCCTTGTCAACATTGAGCAACAAAGCCCTGATATTGCTCAGGGTGTGCATGGCCATCTCACAAAGAGGCCTGAGGAGATTGGTGCTGGTGACCAAGGTCACATGTTTGGCTATGCCACTGATGAGACCCCTGAACTCATGCCATTGAGTCATGTTCTTGCCACCAAGCTTGGGGCTCGCCTCACTGAAGTGCGCAAGAATGGAACTTGCCCTTGGTTGAGGCCTGATGGCAAGACCCAAGTCACTGTTGAGTATTTCAATGACAAGGGTGCAATGGTTCCTATCCGTGTCCACACTGTGCTTATCTCTACACAGCATGATGAGACAGTGACAAATGATGAAATTGCTTCTGATCTCAAAGAGCATGTTATCAAGCCTGTGATCCCTGAGAAGTACCTTGATGAGAAGACCATTTTCCACCTTAACCCTTCTGGTAGGTTTGTCATTGGTGGTCCTCATGGTGATGCTGGTCTCACTGGCCGCAAGATCATCATTGACACTTATGGAGGATGGGGCGCACACGGTGGTGGTGCTTTCTCAGGAAAGGACCCAACAAAAGTTGATAGGAGTGGAGCTTACATTGTGAGACAAGCTGCTAAGAGCATAGTTGCAAATGGACTCGCTAGAAGGTGCCTTGTGCAAGTGTCTTATGCCATTGGTGTACCTGAGCCTTTGTCTGTCTTTGTTGACTCATATGGCACTGGAAAGATCCCTGACAAGGAAATCCTCAAAATTGTGAAGGAGAACTTTGATTTTAGGCCTGGCATGATCTCTATCAACCTTGATCTCAAAAGGGGTGGCAGGTTCTTGAAGACTGCTGCTTATGGACATTTTGGTAGAGATGACACTGACTTTACGTGGGAGGTTGTGAAGCCTCTCAAGGGGGGAAAGGTGCCTGCTTAA 1182 0.4763 MAMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYFNDKGAMVPIRVHTVLISTQHDETVTNDEIASDLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGRFLKTAAYGHFGRDDTDFTWEVVKPLKGGKVPA* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2485 393 ProSitePatterns S-adenosylmethionine synthase signature 2. 268 276 IPR022631 GO:0004478|GO:0006556
Apr1g2485 393 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 4 3 391 - -
Apr1g2485 393 Pfam S-adenosylmethionine synthetase, N-terminal domain 6 103 IPR022628 GO:0004478|GO:0006556
Apr1g2485 393 ProSitePatterns S-adenosylmethionine synthase signature 1. 121 131 IPR022631 GO:0004478|GO:0006556
Apr1g2485 393 SUPERFAMILY S-adenosylmethionine synthetase 5 111 IPR022636 GO:0004478|GO:0006556
Apr1g2485 393 SUPERFAMILY S-adenosylmethionine synthetase 242 386 IPR022636 GO:0004478|GO:0006556
Apr1g2485 393 Pfam S-adenosylmethionine synthetase, central domain 119 240 IPR022629 GO:0004478|GO:0006556
Apr1g2485 393 SUPERFAMILY S-adenosylmethionine synthetase 117 241 IPR022636 GO:0004478|GO:0006556
Apr1g2485 393 PIRSF MAT 1 390 IPR002133 GO:0004478|GO:0005524|GO:0006556
Apr1g2485 393 Hamap S-adenosylmethionine synthase [metK]. 4 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Apr1g2485 393 CDD S-AdoMet_synt 7 384 - -
Apr1g2485 393 Gene3D - 13 282 - -
Apr1g2485 393 TIGRFAM metK: methionine adenosyltransferase 7 386 IPR002133 GO:0004478|GO:0005524|GO:0006556
Apr1g2485 393 Gene3D - 119 381 - -
Apr1g2485 393 Gene3D - 6 245 - -
Apr1g2485 393 Pfam S-adenosylmethionine synthetase, C-terminal domain 242 381 IPR022630 GO:0004478|GO:0006556
Apr1g2485 393 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 3 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2485 Apr-Chr1 34453785 34457822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2485 K00789 - gmx:100787994 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2485 1 34453785 34457822 Apr1g2485 1 34453785 34457822 ECH
Apr1g2485 1 34453785 34457822 Apr8g0038 8 340535 343080 ECH