Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2361 ATGGCAGAGACTTTCCTATTTACCTCCGAGTCAGTGAACGAGGGACACCCTGACAAGCTCTGTGACCAAATCTCCGATGCTGTGCTCGATGCTTGTCTTGAACAGGACCCAGATAGCAAGGTTGCGTGTGAAACATGCACCAAGACCAACTTGGTTATGGTTTTTGGAGAGATCACAACCAAGGCCAACGTTGACTATGAGAAGATTGTGCGTGACACATGCAGGAACATTGGGTTTGTTTCAGAAGATGTAGGGCTTGATGCTGACAATTGCAAGGTCCTTGTATACATTGAGCAACAAAGCCCTGATATTGCTCAGGGTGTGCATGGCCATCTCACCAAAAGGCCTGAGGAAATTGGTGCTGGTGACCAAGGTCACATGTTTGGCTATGCCACTGATGAGACCCCTGAATTGATGCCCCTTAGCCATGTTCTTGCCACCAAGCTCGGTGATCGTCTCACCCAGGTTCGCAAAAATGGAACTTGCTCTTGGCTGAGGCCTGATGGCAAGACCCAAGTCACTGTTGAGTATTACAATGACAAGGGTGCCATGGTTCCAGTTCGCGTTCACACTGTGCTTATCTCAACTCAACATGACGAGACTGTTACAAATGATGAAATTGCTGCTGATCTTAAGGAGCATGTTATCAAGCCTGTGATTCCTGAGAAGTACCTTGATGAGAAGACCATTTTCCACTTGAACCCCTCTGGCCGTTTTGTCATTGGTGGGCCTCATGGTGATGCTGGTCTCACTGGCCGCAAGATCATCATCGACACTTATGGTGGATGGGGTGCACATGGTGGCGGTGCCTTCTCAGGGAAGGACCCAACTAAGGTTGATAGGAGTGGTGCTTACATTGTGAGGCAAGCTGCTAAGAGCATTGTTGCCAGTGGACTTGCCAGAAGGTGCATTGTGCAAGTGTCTTATGCCATTGGTGTGCCTGAGCCTTTGTCTGTCTTTGTTGACACATATGGTACTGGGAAGATCCCTGATAAGGAGATCCTCAAAATTGTGAAGGAGAACTTCGATTTCAGGCCTGGCATGATCTCTATCAACCTTGATCTCAAGAGGGGTGGCAACAACAGGTTCTTGAAGACTGCTGCTTATGGACATTTTGGCAGAGAGGATCCTGACTTCACATGGGAAGTGGTGAAGCCCCTCAAGTGGGAGAAGGCCTAA 1179 0.486 MAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRNIGFVSEDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGDRLTQVRKNGTCSWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNNRFLKTAAYGHFGREDPDFTWEVVKPLKWEKA* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2361 392 TIGRFAM metK: methionine adenosyltransferase 6 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
Apr9g2361 392 SUPERFAMILY S-adenosylmethionine synthetase 116 240 IPR022636 GO:0004478|GO:0006556
Apr9g2361 392 Pfam S-adenosylmethionine synthetase, N-terminal domain 5 102 IPR022628 GO:0004478|GO:0006556
Apr9g2361 392 Hamap S-adenosylmethionine synthase [metK]. 3 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
Apr9g2361 392 Pfam S-adenosylmethionine synthetase, central domain 118 239 IPR022629 GO:0004478|GO:0006556
Apr9g2361 392 PIRSF MAT 1 392 IPR002133 GO:0004478|GO:0005524|GO:0006556
Apr9g2361 392 Pfam S-adenosylmethionine synthetase, C-terminal domain 241 382 IPR022630 GO:0004478|GO:0006556
Apr9g2361 392 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 1 392 - -
Apr9g2361 392 SUPERFAMILY S-adenosylmethionine synthetase 4 110 IPR022636 GO:0004478|GO:0006556
Apr9g2361 392 Gene3D - 5 243 - -
Apr9g2361 392 Gene3D - 12 280 - -
Apr9g2361 392 ProSitePatterns S-adenosylmethionine synthase signature 1. 120 130 IPR022631 GO:0004478|GO:0006556
Apr9g2361 392 ProSitePatterns S-adenosylmethionine synthase signature 2. 267 275 IPR022631 GO:0004478|GO:0006556
Apr9g2361 392 CDD S-AdoMet_synt 6 385 - -
Apr9g2361 392 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 1 392 IPR002133 GO:0004478|GO:0005524|GO:0006556
Apr9g2361 392 SUPERFAMILY S-adenosylmethionine synthetase 241 389 IPR022636 GO:0004478|GO:0006556
Apr9g2361 392 Gene3D - 118 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2361 Apr-Chr9 31219265 31221514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2361 K00789 - gmx:100799139 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2361 9 31219265 31221514 Apr9g2361 9 31219265 31221514 ECH
Apr9g2361 9 31219265 31221514 Apr8g0038 8 340535 343080 ECH